IMIS - Marine Research Groups

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De Veylder, Lieven
ORCID

Institute
Publications (25)
Project

Flanders Institute for Biotechnology; VIB-Ugent Center for Plant Systems Biology (PSB), more

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Sex signaling and life cycle evolution in pennate diatoms, more

A1 Publications (19) [show]
Bilcke, G.; Van den Berge, K.; Bonneure, E.; Poulsen, N.; Bulankova, P.; Osuna-Cruz, C.M.; Dickenson, J.; Sabbe, K.; Pohnert, G.; Vandepoele, K.; Mangelinckx, S.; Clement, L.; De Veylder, L.; Vyverman, W. (2021). Mating type specific transcriptomic response to sex inducing pheromone in the pennate diatom Seminavis robusta. ISME J. 15(2): 562-576. https://dx.doi.org/10.1038/s41396-020-00797-7, more Bilcke, G.; Van Craenenbroeck, L.; Castagna, A.; Osuna-Cruz, C.M.; Vandepoele, K.; Sabbe, K.; De Veylder, L.; Vyverman, W. (2021). Light intensity and spectral composition drive reproductive success in the marine benthic diatom Seminavis robusta. NPG Scientific Reports 11(1): 17560. https://dx.doi.org/10.1038/s41598-021-92838-0, more Bilcke, G.; Osuna-Cruz, C.M.; Silva, M.S.; Poulsen, N.; D'hondt, S.; Bulankova, P.; Vyverman, W.; De Veylder, L.; Vandepoele, K. (2021). Diurnal transcript profiling of the diatom Seminavis robusta reveals adaptations to a benthic lifestyle. Plant J. 107(1): 315-336. https://dx.doi.org/10.1111/tpj.15291, more Bulankova, P.; Sekulić, M.; Jallet, D.; Nef, C.; Van Oosterhout, C.; Delmont, T.O.; Vercauteren, I.; Osuna-Cruz, C.M.; Vancaester, E.; Mock, T.; Sabbe, K.; Daboussi, F.; Bowler, C.; Vyverman, W.; Vandepoele, K.; De Veylder, L. (2021). Mitotic recombination between homologous chromosomes drives genomic diversity in diatoms. Curr. Biol. 31(15): 3221-3232. https://dx.doi.org/10.1016/j.cub.2021.05.013, more Osuna-Cruz, C.M.; Bilcke, G.; Vancaester, E.; De Decker, S.; Bones, A.M.; Winge, P.; Poulsen, N.; Bulankova, P.; Verhelst, B.; Audoor, S.; Belisova, D.; Pargana, A.; Russo, M.; Stock, F.; Cirri, E.; Brembu, T.; Pohnert, G.; Piganeau, G.; Ferrante, M.I.; Mock, T.; Sterck, L.; Sabbe, K.; De Veylder, L.; Vyverman, W.; Vandepoele, K. (2020). Author correction: The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms. Nature Comm. 11: 5331. https://dx.doi.org/10.1038/s41467-020-19222-w, more Osuna-Cruz, C.M.; Bilcke, G.; Vancaester, E.; De Decker, S.; Bones, A.M.; Winge, P.; Poulsen, N.; Bulankova, P.; Verhelst, B.; Audoor, S.; Belisova, D.; Pargana, A.; Russo, M.; Stock, F.; Cirri, E.; Brembu, T.; Pohnert, G.; Piganeau, G.; Ferrante, M.I.; Mock, T.; Sterck, L.; Sabbe, K.; De Veylder, L.; Vyverman, W.; Vandepoele, K. (2020). The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms. Nature Comm. 11(1): 3320. https://hdl.handle.net/10.1038/s41467-020-17191-8, more Stock, F.; Bilcke, G.; De Decker, S.; Osuna-Cruz, C.M.; Van den Berge, K.; Vancaester, E.; De Veylder, L.; Vandepoele, K.; Mangelinckx, S.; Vyverman, W. (2020). Distinctive growth and transcriptional changes of the diatom Seminavis robusta in response to quorum sensing related compounds. Front. Microbiol. 11: 1240. https://dx.doi.org/10.3389/fmicb.2020.01240, more Cirri, E.; De Decker, S.; Bilcke, G.; Werner, M.; Osuna-Cruz, C.M.; De Veylder, L.; Vandepoele, K.; Werz, O.; Vyverman, W.; Pohnert, G. (2019). Associated bacteria affect sexual reproduction by altering gene expression and metabolic processes in a biofilm inhabiting diatom. Front. Microbiol. 10: 1790. https://dx.doi.org/10.3389/fmicb.2019.01790, more Patil, S.; Moeys, S.; von Dassow, P.; Huysman, M.J.J.; Mapleson, D.; De Veylder, L.; Sanges, R.; Vyverman, W.; Montresor, M.; Ferrante, M.I. (2019). Correction to: identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudonitzschia multistriata and Seminavis robusta. BMC Genom. 20: 544. https://dx.doi.org/10.1186/s12864-019-5942-4, more De Decker, S.; Vanormelingen, P.; Sefbom, J.; Lembke, C.; Van den Berghe, K.; Vandepoele, K.; Sabbe, K.; De Veylder, L.; Pohnert, G.; Clement, L.; Vyverman, W. (2017). Identifying drivers of sympatric speciation in the marine benthic diatom Seminavis robusta using metabolic analysis and whole-genome resequencing. Phycologia 56(4): 41-42, more Moeys, S.; Frenkel, J.; Lembke, C.; Gillard, J.; Devos, V.; Van den Berge, K.; Bouillon, B.; Huysman, M.J.J.; De Decker, S.; Scharf, J.; Bones, A.; Brembu, T.; Winge, P.; Sabbe, K.; Vuylsteke, M.; Clement, L.; De Veylder, L.; Pohnert, G.; Vyverman, W. (2016). A sex-inducing pheromone triggers cell cycle arrest and mate attraction in the diatom Seminavis robusta. NPG Scientific Reports 6(19252): 13 pp. https://dx.doi.org/10.1038/srep19252, more Huysman, M.J.J.; Tanaka, A.; Bowler, C.; Vyverman, W.; De Veylder, L. (2015). Functional characterization of the diatom cyclin-dependent kinase A2 as a mitotic regulator reveals plant-like properties in a non-green lineage. BMC Plant Biol. 15. dx.doi.org/10.1186/s12870-015-0469-6, more Patil, S.; Moeys, S.; von Dassow, P.; Huysman, M.J.J.; Mapleson, D.; De Veylder, L.; Sanges, R.; Vyverman, W.; Montresor, M.; Ferrante, M.I. (2015). Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta. BMC Genom. 16: 21 pp. https://dx.doi.org/10.1186/s12864-015-1983-5, more Huysman, M.J.J.; Martens, C.; Vyverman, W.; De Veylder, L. (2014). Protein degradation during the diatom cell cycle: annotation and transcriptional analysis of SCF and APC/C ubiquitin ligase genes in Phaeodactylum tricornutum. Marine Genomics 14: 39-46. dx.doi.org/10.1016/j.margen.2013.09.001, more Huysman, M.J.J.; Vyverman, W.; De Veylder, L. (2014). Molecular regulation of the diatom cell cycle. J. Exp. Bot. 65(10): 2573-2584. https://dx.doi.org/10.1093/jxb/ert387, more Huysman, M.J.J.; Fortunato, A.; Matthijs, M.; Costa, B.; Vanderhaeghen, R.; Van den Daele, H.; Sachse, M.; Inzé, D.; Bowler, C.; Kroth, P.; Wilhelm, C.; Falciatore, A.; Vyverman, W.; De Veylder, L. (2013). AUREOCHROME1a-mediated induction of the diatom-specific cyclin dsCYC2 controls the onset of cell division in diatoms (Phaeodactylum tricornutum). Plant Cell 25(1): 215-228. dx.doi.org/10.1105/tpc.112.106377, more Vannerum, K.; Huysman, M.J.J.; De Rycke, R.; Vuylsteke, M.; Leliaert, F.; Pollier, J.; Lütz-Meindl, U.; Gillard, J.; De Veylder, L.; Goossens, A.; Inzé, D.; Vyverman, W. (2011). Transcriptional analysis of cell growth and morphogenesis in the unicellular green alga Micrasterias (Streptophyta), with emphasis on the role of expansin. BMC Plant Biol. 11(128). dx.doi.org/10.1186/1471-2229-11-128, more Huysman, M.J.J.; Martens, C.; Vandepoele, K.; Gillard, J.; Rayko, E.; Heijde, M.; Bowler, C.; Inzé, D.; Van de Peer, Y.; De Veylder, L.; Vyverman, W. (2010). Genome-wide analysis of the diatom cell cycle unveils a novel type of cyclins involved in environmental signaling. Genome Biol. 11(2): 19 pp. http://dx.doi.org/10.1186/gb-2010-11-2-r17, more Gillard, J.; Devos, V.; Huysman, M.J.J.; De Veylder, L.; D’Hondt, S.; Martens, C.; Vanormelingen, P.; Vannerum, K.; Sabbe, K.; Chepurnov, V.A.; Inzé, D.; Vuylsteke, M.; Vyverman, W. (2008). Physiological and transcriptomic evidence for a close coupling between chloroplast ontogeny and cell cycle progression in the pennate diatom Seminavis robusta. Plant Physiol. 148(3): 1394-1411. http://dx.doi.org/10.1104/pp.108.122176, more
Abstracts (6) [show]
Cleyman, A.; Bilcke, G.; Rijsdijk, N.; Vyverman, W.; Vandepoele, K.; De Veylder, L. (2024). Fluorescent tagging of sexual cell type identity in a marine diatom, in: Mees, J. et al. Book of abstracts – VLIZ Marine Science Day, 6 March 2024, Oostende. VLIZ Special Publication, 91: pp. 59, more Sekulic, M.; Cleyman, A.; Bulankova, P.; De Veylder, L.; Vyverman, W. (2024). Development of a forward genetic screen based on mitotic recombination in diatoms, in: Mees, J. et al. Book of abstracts – VLIZ Marine Science Day, 6 March 2024, Oostende. VLIZ Special Publication, 91: pp. 115, more Bulankova, P.; Moeys, S.; Bouillon, B.; Huysman, M.J.J.; Verhelst, B.; Vancaester, E.; Vandepoele, K.; Sabbe, K.; Vyverman, W.; De Veylder, L. (2016). Uncovering the sex determining locus in diatom Seminavis robusta, in: Pienitz, R. et al. (Ed.) IDS 2016: 24th International Diatom Symposium, Quebec, Canada, 21-26 August 2016: Program & Abstracts. pp. 158, more Moeys, S.; Gillard, J.; Bouillon, B.; Van Den Berge, K.; Huysman, M.; Clement, L.; Sabbe, K.; De Veylder, L.; Vyverman, W. (2015). Molecular regulation of mating in the pennate diatom Seminavis robusta, in: Mees, J. et al. (Ed.) Book of abstracts – VLIZ Young Scientists’ Day. Brugge, Belgium, 20 February 2015. VLIZ Special Publication, 71: pp. 93, more Huysman, M.J.J.; Fortunato, A.E.; Matthijs, M.; Van den Daele, H.; Inzé, D.; Bowler, C.; Falciatore, A.; De Veylder, L.; Vyverman, W. (2012). Unravelling the light-dependent cell cycle onset in diatoms, in: Mees, J. et al. (Ed.) Book of abstracts - VLIZ Young Marine Scientists' Day. Brugge, Belgium, 24 February 2012. VLIZ Special Publication, 55: pp. 41, more Huysman, M.J.J.; Fortunato, A.E.; Matthijs, M.; Van den Daele, H.; Inzé, D.; Bowler, C.; Kroth, P.G.; Falciatore, A.; Vyverman, W. (2012). Control of light-dependent cell cycle onset by the diatom-specific cyclin dsCYC2, in: Sabbe, K. et al. (Ed.) Twenty-second International Diatom Symposium, Aula Academica, Ghent, 26-31 August 2012. Abstracts. VLIZ Special Publication, 58: pp. 52, more