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Sinninghe Damste, Jaap
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Instituut
Publicaties (425)

Koninklijk Nederlands Instituut voor Onderzoek der Zee; Marine Microbiology and Biogeochemistry (MMB), meer

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A1 publicaties (398) [show]
Baxter, A.J.; Peterse, F; Verschuren, D.; Sinninghe Damste, J.S. (2024). Assessment of branched glycerol monoalkyl glycerol tetraether (brGMGT)-based paleothermometry in the 250,000-year sediment record of Lake Chala, equatorial East Africa. Org. Geochem. 195: 104812. https://dx.doi.org/10.1016/j.orggeochem.2024.104812, meer Baxter, A.J.; Peterse, F.; Verschuren, D.; Maitituerdi, A.; Waldmann, N.; Sinninghe Damsté, J.S. (2024). Disentangling influences of climate variability and lake-system evolution on climate proxies derived from isoprenoid and branched glycerol dialkyl glycerol tetraethers (GDGTs): the 250 kyr Lake Chala record. Biogeosciences 21(11): 2877-2908. https://dx.doi.org/10.5194/bg-21-2877-2024, meer Ding, S.; Grossi, V.; Hopmans, E.C.; Bale, N.J.; Cravo-Laureau, C.; Sinninghe Damsté, J.S. (2024). Nitrogen and sulfur for phosphorus: Lipidome adaptation of anaerobic sulfate-reducing bacteria in phosphorus-deprived conditions. Proc. Natl. Acad. Sci. U.S.A. 121(24): e2400711121. https://dx.doi.org/10.1073/pnas.2400711121, meer Ding, S.; von Meijenfeldt, F. A.B.; Bale, N.J.; Sinninghe Damsté, J.S; Villanueva, L. (2024). Production of structurally diverse sphingolipids by anaerobic marine bacteria in the euxinic Black Sea water column. ISME J. 18(1). https://dx.doi.org/10.1093/ismejo/wrae153, meer Ding, S.; Hamm, J.N.; Bale, N.J.; Sinninghe Damsté, J.S.; Spang, A. (2024). Selective lipid recruitment by an archaeal DPANN symbiont from its host. Nature Comm. 15(1): 3405. https://dx.doi.org/10.1038/s41467-024-47750-2, meer Golyshina, O.V.; Lunev, E.A.; Distaso, M.A.; Bargiela, R.; Gaines, M.C.; Daum, B.; Ferrer, M.; Bale, N.; Koenen, M.; Sinninghe Damsté, J.S.; Yakimov, M.; Golyshin, P.N. (2024). Oxyplasma meridianum gen. nov., sp. nov., an extremely acidophilic organotrophic member of the order Thermoplasmatales. Int. J. Syst. Evol. Microbiol. 74(8): 006499. https://dx.doi.org/10.1099/ijsem.0.006499, meer Hopmans, E.C.; Grossi, V.; Sahonero Canavesi, D.; Bale, N.J.; Cravo-Laureau, C.; Sinninghe Damsté, J.S (2024). Mono- to tetra-alkyl ether cardiolipins in a mesophilic, sulfate-reducing bacterium identified by UHPLC-HRMSn: a novel class of membrane lipids. Front. Microbiol. 15: 1404328. https://dx.doi.org/10.3389/fmicb.2024.1404328, meer Moros, M.; Kotilainen, A.T.; Snowball, I.; Neumann, T.; Perner, Kerstin; Meier, H.E.M.; Papenmeier, S.; Kolling, H.; Leipe, T.; Sinninghe Damsté, J.S.; Schneider, R. (2024). Giant saltwater inflow in AD 1951 triggered Baltic Sea hypoxia. Boreas 53(2): 125-138. https://dx.doi.org/10.1111/bor.12643, meer Sorokin, D.Y.; Elcheninov, A.G.; Bale, N.; Sininghe Damsté, J. ; Kublanov, I.V. (2024). Natronosalvus hydrolyticus sp. nov., a beta-1,3-glucan utilizing natronoarchaeon from hypersaline soda lakes. Syst. Appl. Microbiol. 47(2-3): 126514. https://dx.doi.org/10.1016/j.syapm.2024.126514, meer Sorokin, D.Y.; Merkel, A.Y.; Kolganova, T.V.; Bale, N.; Sinninghe Damsté, J.S (2024). Natronospira bacteriovora sp. nov., and Natronospira elongata sp. nov., extremely salt-tolerant predatory proteolytic bacteria from soda lakes and proposal to classify the genus Natronospira into Natronospiraceae fam. nov., and Natronospirales ord. nov., within the class Gammaproteobacteria. Syst. Appl. Microbiol. 47(4): 126519. https://dx.doi.org/10.1016/j.syapm.2024.126519, meer Sorokin, D.Y.; Elcheninov, A.G.; Bale, N.J.; Sinninghe Damsté, J.S; Kublanov, I.V. (2024). Natronoglomus mannanivorans gen. nov., sp. nov., beta-1,4-mannan utilizing natronoarchaea from hypersaline soda lakes. Front. Microbiol. 15: 1364606. https://dx.doi.org/10.3389/fmicb.2024.1364606, meer van Kemenade, Z.R.; Erdem, Z.; Hopmans, E.C.; Sinninghe Damsté, J.S; Rush, D. (2024). Loss of nitrogen via anaerobic ammonium oxidation (anammox) in the California Current system during the late Quaternary. Biogeosciences 21(6): 1517-1532. https://dx.doi.org/10.5194/bg-21-1517-2024, meer Varma, D.; Hopmans, E.C.; van Kemenade, Z.R.; Kusch, S.; Berg, S.; Bale, N.J.; Sangiorgi, F.; Reichart, G.-J.; Sinninghe Damsté, J.S; Schouten, S. (2024). Evaluating isoprenoidal hydroxylated GDGT-based temperature proxies in surface sediments from the global ocean. Geochim. Cosmochim. Acta 370: 113-127. https://dx.doi.org/10.1016/j.gca.2023.12.019, meer Witkowski, C.R.; von der Heydt, A.S.; Valdes, P.J.; van der Meer, M.T.J.; Schouten, S.; Sinninghe Damsté, J.S. (2024). Continuous sterane and phytane δ13C record reveals a substantial pCO2 decline since the mid-Miocene. Nature Comm. 15(1): 5192. https://dx.doi.org/10.1038/s41467-024-47676-9, meer Yadav, S.; Koenen, M.; Bale, N.; Reitsma, W.; Engelmann, J.C.; Stefanova, K.; Sinninghe Damsté, J.S; Villanueva, L. (2024). Organic matter degradation in the deep, sulfidic waters of the Black Sea: insights into the ecophysiology of novel anaerobic bacteria. Microbiome 12(1): 98. https://dx.doi.org/10.1186/s40168-024-01816-x, meer Zuffa, S.; Schmid, R.; Bauermeister, A.; P. Gomes, P.W.; Caraballo-Rodriguez, A.M.; El Abiead, Y.; Aron, A.T.; Gentry, E.C.; Zemlin, J.; Meehan, M.J.; Avalon, N.E.; Cichewicz, R.H.; Buzun, E.; Terrazas, M.C.; Hsu, C.-Y.; Oles, R.; Ayala, A.V.; Zhao, J.; Chu, H.; Kuijpers, M.C.M.; Jackrel, S.L.; Tugizimana, F.; Nephali, L.P.; Dubery, I.A.; Madala, N.E.; Moreira, E.A.; Costa-Lotufo, L.V.; Lopes, N.P.; Rezende-Teixeira, P.; Jimenez, P.C.; Rimal, B.; Patterson, A.D.; Traxler, M.F.; Pessotti, R. de Cassia; Alvarado-Villalobos, D.; Tamayo-Castillo, G.; Chaverri, P.; Escudero-Leyva, E.; Quiros-Guerrero, L.-M.; Bory, A.J.; Joubert, J.; Rutz, A.; Wolfender, J.-L.; Allard, P.-M.; Sichert, A.; Pontrelli, S.; Pullman, B.S.; Bandeira, N.; Gerwick, W.H.; Gindro, K.; Massana-Codina, J.; Wagner, B.C.; Forchhammer, K.; Petras, D.; Aiosa, N.; Garg, N.; Liebeke, M.; Bourceau, P.; Kang, K.B.; Gadhavi, H.; de Carvalho, L.P.S.; Silva dos Santos, M.; Pérez-Lorente, A.I.; Molina-Santiago, C.; Romero, D.; Franke, R.; Brönstrup, M.; Vera Ponce de León, A.; Pope, P.B.; La Rosa, S.L.; La Barbera, G.; Roager, H.M.; Laursen, M.F.; Hammerle, F.; Siewert, B.; Peintner, U.; Licona-Cassani, C.; Rodriguez-Orduña, L.; Rampler, E.; Hildebrand, F.; Koellensperger, G.; Schoeny, H.; Hohenwallner, K.; Panzenboeck, L.; Gregor, R.; O’Neill, E.C.; Roxborough, E.T.; Odoi, J.; Bale, N.J.; Ding, S.; Sinninghe Damsté, J.S.; Guan, X.L.; Cui, J.J.; Ju, K.-S.; Silva, D.B.; Silva, F.M.R.; da Silva, G.F.; Koolen, H.H.F.; Grundmann, C.; Clement, J.A.; Mohimani, H.; Broders, K.; McPhail, K.L.; Ober-Singleton, S.E.; Rath, C.M.; McDonald, D.; Knight, R.; Wang, M.; Dorrestein, P.C. (2024). microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data. Nature Microbiology 9(2): 336-345. https://dx.doi.org/10.1038/s41564-023-01575-9, meer Baxter, A.J.; Verschuren, D.; Peterse, F.; Miralles, D.G.; Martin-Jones, C.M.; Maitituerdi, A.; Van der Meeren, T.; Van Daele, M.; Lane, C.S.; Haug, G.H.; Olago, D.O.; Sinninghe Damsté, J.S. (2023). Reversed Holocene temperature–moisture relationship in the Horn of Africa. Nature (Lond.) 620(7973): 336-343. https://dx.doi.org/10.1038/s41586-023-06272-5, meer Pérez Gallego, R.; Bale, N.J.; Sinninghe Damsté, J.S; Villanueva, L. (2023). Developing a genetic approach to target cyanobacterial producers of heterocyte glycolipids in the environment. Front. Microbiol. 14: 1257040. https://dx.doi.org/10.3389/fmicb.2023.1257040, meer Pérez Gallego, R.; Bale, N.J.; Sinninghe Damsté, J.S; Villanueva, L. (2023). Developing a genetic approach to target cyanobacterial producers of heterocyte glycolipids in the environment. Front. Microbiol. 14: 1257040. https://dx.doi.org/10.3389/fmicb.2023.1257040, meer Pérez Gallego, R.; Bale, N.J.; Sinninghe Damsté, J.S; Villanueva, L. (2023). Developing a genetic approach to target cyanobacterial producers of heterocyte glycolipids in the environment. Front. Microbiol. 14: 1257040. https://dx.doi.org/10.3389/fmicb.2023.1257040, meer Sinninghe Damsté, J.S; Rijpstra, W.I.C.; Huber, K.J.; Albuquerque, L.; Egas, C.; Bale, N. (2023). Dominance of mixed ether/ester, intact polar membrane lipids in five species of the order Rubrobacterales: Another group of bacteria not obeying the “lipid divide”. Syst. Appl. Microbiol. 46(2): 126404. https://dx.doi.org/10.1016/j.syapm.2023.126404, meer Sorokin, D.Y.; Elcheninov, A.G.; Merkel, A.Y.; Bale, N.; Sinninghe Damste, J.S.; Kublanov, I.V. (2023). Halapricum hydrolyticum sp. nov., a beta-1,3-glucan utilizing haloarchaeon from hypersaline lakes. Syst. Appl. Microbiol. 46(6): 126471. https://dx.doi.org/10.1016/j.syapm.2023.126471, meer Tamby, A.; Sinninghe Damsté, J.S; Villanueva, L. (2023). Microbial membrane lipid adaptations to high hydrostatic pressure in the marine environment. Front. Mol. Biosci. 9: 1058381. https://dx.doi.org/10.3389/fmolb.2022.1058381, meer Toucanne, S.; Rodrigues, T.; Menot, G.; Soulet, G.; Cheron, S.; Billy, I.; Eynaud, F.; Antoine, P.; Sinninghe Damsté, J.S.; Bard, E.; Sanchez Goñi, M.F. (2023). Marine isotope stage 4 (71–57 ka) on the Western European margin: Insights to the drainage and dynamics of the Western European ice sheet. Global Planet. Change 229: 104221. https://dx.doi.org/10.1016/j.gloplacha.2023.104221, meer van Kemenade, Z.R.; Cutmore, A.; Hennekam, R.; Hopmans, E.C.; van der Meer, M.T.J.; Mojtahid, M.; Jorissen, F.; Bale, N.; Reichart, G.-J.; Sinninghe Damsté, J.S; Rush, D. (2023). Marine nitrogen cycling dynamics under altering redox conditions: Insights from deposition of sapropels S1 and the ambiguous S2 in the Eastern Mediterranean Sea. Geochim. Cosmochim. Acta 354: 197-210. https://dx.doi.org/10.1016/j.gca.2023.06.018, meer Yedema, Y.W.; Sangiorgi, F.; Sluijs, A.; Sinninghe Damsté, J.S.; Peterse, F (2023). The dispersal of fluvially discharged and marine, shelf-produced particulate organic matter in the northern Gulf of Mexico. Biogeosciences 20(3): 663-686. https://dx.doi.org/10.5194/bg-20-663-2023, meer Ding, S.; Henkel, J.V.; Hopmans, E.C.; Bale, N.J.; Koenen, M.; Villanueva, L.; Sinninghe Damsté, J.S. (2022). Changes in the membrane lipid composition of a Sulfurimonas species depend on the electron acceptor used for sulfur oxidation. ISME Commun. 2: 121. https://dx.doi.org/10.1038/s43705-022-00207-3, meer Hoorn, C.; Kukla, T.; Bogotá-Angel, G.; van Soelen, E.E.; González-Arango, C.; Wesselingh, F.P.; Vonhof, H.B.; Val, P.; Morcote-Rios, G.; Roddaz, M.; Dantas, E.L.; Santos, R.V.; Sinninghe Damsté, J.S.; Kim, J.-H.; Morley, R.J. (2022). Cyclic sediment deposition by orbital forcing in the Miocene wetland of western Amazonia? New insights from a multidisciplinary approach. Global Planet. Change 210: 103717. https://dx.doi.org/10.1016/j.gloplacha.2021.103717, meer Kulichevskaya, I.S.; Ivanova, A.A.; Suzina, N.E.; Sinninghe Damsté, J.S.; Dedysh, S.N. (2022). Anatilimnocola floriformis sp. nov., a novel member of the family Pirellulaceae from a boreal lake, and emended description of the genus Anatilimnocola. Antonie van Leeuwenhoek 115: 1253-1264. https://dx.doi.org/10.1007/s10482-022-01769-x, meer Rodrigo-Gámiz, M.; García-Alix, A.; Jiménez-Moreno, G.; Ramos-Román, M.J.; Camuera, J.; Toney, J.L.; Sachse, D.; Anderson, R.S.; Sinninghe Damsté, J.S (2022). Paleoclimate reconstruction of the last 36 kyr based on branched glycerol dialkyl glycerol tetraethers in the Padul palaeolake record (Sierra Nevada, southern Iberian Peninsula). Quat. Sci. Rev. 281: 107434. https://dx.doi.org/10.1016/j.quascirev.2022.107434, meer Sahonero Canavesi, D.X.; Siliakus, M.F.; Abdala Asbun, A.; Koenen, M.; von Meijenfeldt, F. A.B.; Boeren, S.; Bale, N.J.; Engelmann, J.C.; Fiege, K.; Strack van Schijndel, L.; Sinninghe Damsté, J.S.; Villanueva, L. (2022). Disentangling the lipid divide: Identification of key enzymes for the biosynthesis of membrane-spanning and ether lipids in bacteria. Science Advances 8(50). https://dx.doi.org/10.1126/sciadv.abq8652, meer Sahonero Canavesi, D.X.; Villanueva, L.; Bale, N.J.; Bosviel, J.; Koenen, M.; Hopmans, E.C.; Sinninghe Damsté, J.S. (2022). Changes in the distribution of membrane lipids during growth of Thermotoga maritima at different temperatures: Indications for the potential mechanism of biosynthesis of ether-bound diabolic acid (membrane-spanning) lipids. Appl. Environ. Microbiol. 88(2). https://dx.doi.org/10.1128/aem.01763-21, meer Sánchez-Andrea, I.; van der Graaf, C.M.; Hornung, B.; Bale, N.J.; Jarzembowska, M.; Sousa, D.Z.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Stams, A.J.M. (2022). Acetate degradation at low pH by the moderately acidophilic sulfate reducer Acididesulfobacillus acetoxydans gen. nov. sp. nov. Front. Microbiol. 13: 816605. https://dx.doi.org/10.3389/fmicb.2022.816605, meer Sinninghe Damsté, J.S; Weber, Y.; Zopfi, J.; Lehmann, M.F.; Niemann, H. (2022). Distributions and sources of isoprenoidal GDGTs in Lake Lugano and other central European (peri-)alpine lakes: Lessons for their use as paleotemperature proxies. Quat. Sci. Rev. 277: 107352. https://dx.doi.org/10.1016/j.quascirev.2021.107352, meer Sinninghe Damsté, J.S.; Warden, L.A.; Berg, C.; Jürgens, K.; Moros, M. (2022). Evaluation of the distributions of hydroxylated glycerol dibiphytanyl glycerol tetraethers (GDGTs) in Holocene Baltic Sea sediments for reconstruction of sea surface temperature: the effect of changing salinity. Clim. Past 18(10): 2271-2288. https://dx.doi.org/10.5194/cp-18-2271-2022, meer Sorokin, D.Y.; Yakimov, M.; Messina, E.; Merkel, A.Y.; Koenen, M.; Bale, N.J.; Sinninghe Damsté, J.S. (2022). Natranaeroarchaeum sulfidigenes gen. nov., sp. nov., carbohydrate-utilizing sulfur-respiring haloarchaeon from hypersaline soda lakes, a member of a new family Natronoarchaeaceae fam. nov. in the order Halobacteriales. Syst. Appl. Microbiol. 45(6): 126356. https://dx.doi.org/10.1016/j.syapm.2022.126356, meer Sorokin, D.Y.; Elcheninov, A.G.; Khizhniak, T.V.; Koenen, M.; Bale, N.J.; Sinninghe Damsté, J.S.; Kublanov, I.V. (2022). Natronocalculus amylovorans gen. nov., sp. nov., and Natranaeroarchaeum aerophilus sp. nov., dominant culturable amylolytic natronoarchaea from hypersaline soda lakes in southwestern Siberia. Syst. Appl. Microbiol. 45(4): 126336. https://dx.doi.org/10.1016/j.syapm.2022.126336, meer Suominen, S.; Gomez-Saez, G.V.; Dittmar, T.; Sinninghe Damsté, J.S; Villanueva, L. (2022). Interplay between microbial community composition and chemodiversity of dissolved organic matter throughout the Black Sea water column redox gradient. Limnol. Oceanogr. 67(2): 329-347. https://dx.doi.org/10.1002/lno.11995, meer van Kemenade, Z.R.; Villanueva, L.; Hopmans, E.C.; Kraal, P.; Witte, H.J.; Sinninghe Damsté, J.S.; Rush, D. (2022). Bacteriohopanetetrol-x: constraining its application as a lipid biomarker for marine anammox using the water column oxygen gradient of the Benguela upwelling system. Biogeosciences 19(1): 201-221. https://dx.doi.org/10.5194/bg-19-201-2022, meer Ahn, A.-C.; Jongepier, E.; Schuurmans, J.M.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S; Galinski, E.A.; Roman, P.; Sorokin, D.Y.; Muyzer, G. (2021). Molecular and physiological adaptations to low temperature in Thioalkalivibrio strains isolated from soda lakes with different temperature regimes. mSystems 6(2): e01202-20. https://dx.doi.org/10.1128/msystems.01202-20, meer Bale, N.J.; Ding, S.; Hopmans, E.C.; Arts, M.G.I.; Villanueva, L.; Boschman, C.; Haas, A.F.; Schouten, S.; Sinninghe Damsté, J.S (2021). Lipidomics of environmental microbial communities. I: visualization of component distributions using untargeted analysis of high-resolution mass spectrometry data. Front. Microbiol. 12. https://dx.doi.org/10.3389/fmicb.2021.659302, meer Baxter, A.J.; van Bree, L.G.J.; Peterse, F.; Hopmans, E.C.; Villanueva, L.; Verschuren, D.; Sinninghe Damste, J.S. (2021). Seasonal and multi-annual variation in the abundance of isoprenoid GDGT membrane lipids and their producers in the water column of a meromictic equatorial crater lake (Lake Chala, East Africa). Quat. Sci. Rev. 273: 107263. https://dx.doi.org/10.1016/j.quascirev.2021.107263, meer Baxter, A.J.; Peterse, F.; Verschuren, D.; Sinninghe Damsté, J.S. (2021). Anoxic in situ production of bacterial GMGTs in the water column and surficial bottom sediments of a meromictic tropical crater lake: Implications for lake paleothermometry. Geochim. Cosmochim. Acta 306: 171-188. https://dx.doi.org/10.1016/j.gca.2021.05.015, meer de L. Sobrinho, R.; Bernardes, M.C.; de Rezende, C.E.; Kim, J.-H; Schouten, S.; Sinninghe Damsté, J.S (2021). A multiproxy approach to characterize the sedimentation of organic carbon in the Amazon continental shelf. Mar. Chem. 232: 103961. https://doi.org/10.1016/j.marchem.2021.103961, meer Dearing Crampton-Flood, E.; van der Weijst, C.M.H.; van der Molen, G.; Bouquet, M.; Yedema, Y.; Donders, T.H.; Sangiorgi, F.; Sluijs, A.; Sinninghe Damsté, J.S; Peterse, F (2021). Identifying marine and freshwater overprints on soil-derived branched GDGT temperature signals in Pliocene Mississippi and Amazon River fan sediments. Org. Geochem. 154: 104200. https://doi.org/10.1016/j.orggeochem.2021.104200, meer Ding, S.; Bale, N.J.; Hopmans, E.C.; Villanueva, L.; Arts, M.G.I.; Schouten, S.; Sinninghe Damsté, J.S (2021). Lipidomics of environmental microbial communities. II: characterization using molecular networking and information theory. Front. Microbiol. 12: 659315. https://dx.doi.org/10.3389/fmicb.2021.659315, meer Erdem, Z.; Lattaud, J.; van Erk, M.R.; Mezger, E.M.; Reichart, G.-J.; Lückge, A.; Sinninghe Damste, J.S.; Schouten, S. (2021). Applicability of the long chain diol index (LDI) as a sea surface temperature proxy in the Arabian Sea. Paleoceanography and Paleoclimatology 36(12): e2021PA004255. https://dx.doi.org/10.1029/2021pa004255, meer Fletcher, T.; Eble, C.; Sinninghe Damsté, J.S.; Brown, K.J.; Rybczynski, N.; Gosse, J.; Liu, Z.; Ballantyne, A. (2021). Widespread wildfire across the Pliocene Canadian Arctic Archipelago. Palaeogeogr. Palaeoclimatol. Palaeoecol. 584: 110653. https://dx.doi.org/10.1016/j.palaeo.2021.110653, meer Holzheimer, M.; Sinninghe Damste, J.S.; Schouten, S.; Havenith, R.W.A.; Minnaard, A.J. (2021). Total synthesis of the alleged structure of crenarchaeol enables structure revision. Angew. Chem. 133(32): 17645-17654. https://doi.org/10.1002/ange.202105384, meer Hopmans, E.C.; Smit, N.T.; Schwartz-Narbonne, R.; Sinninghe Damsté, J.S.; Rush, D. (2021). Analysis of non-derivatized bacteriohopanepolyols using UHPLC-HRMS reveals great structural diversity in environmental lipid assemblages. Org. Geochem. 160: 104285. https://dx.doi.org/10.1016/j.orggeochem.2021.104285, meer Lattaud, J.; Balzano, S.; van der Meer, M.T.J.; Villanueva, L.; Hopmans, E.C.; Sinninghe Damsté, J.S; Schouten, S. (2021). Sources and seasonality of long-chain diols in a temperate lake (Lake Geneva). Org. Geochem. 156: 104223. https://doi.org/10.1016/j.orggeochem.2021.104223, meer Morcillo-Montalbá, L.; Rodrigo-Gamiz, M.; Martinez-Ruiz, F.; Ortega-Huertas, M.; Schouten, S.; Sinninghe Damsté, J.S. (2021). Rapid climate changes in the Western most Mediterranean (Alboran Sea) over the last 35 kyr: New insights from four lipid paleothermometers (U^K'₃₇, TEX^H₈₆, RI‐OH', and LDI). Paleoceanography and Paleoclimatology 36(12): e2020PA004171. https://dx.doi.org/10.1029/2020pa004171, meer Riekenberg, P.M.; Camalich, J.; Svensson, E.; IJsseldijk, L.L.; Brasseur, S.M.; Witbaard, R.; Leopold, M.F.; Rebolledo, E.B.; Middelburg, J.J.; Van der Meer, M.T.J.; Sinninghe Damsté, J.S.; Schouten, S. (2021). Reconstructing the diet, trophic level and migration pattern of mysticete whales based on baleen isotopic composition. Royal Society Open Science 8(12): 210949. https://dx.doi.org/10.1098/rsos.210949, meer Smit, N.T.; Villanueva, L.; Rush, D.; Grassa, F.; Witkowski, C.R.; Holzheimer, M.; Minnaard, A.J.; Sinninghe Damsté, J.S.; Schouten, S. (2021). Novel hydrocarbon-utilizing soil mycobacteria synthesize unique mycocerosic acids at a Sicilian everlasting fire. Biogeosciences 18(4): 1463-1479. https://doi.org/10.5194/bg-18-1463-2021, meer Sorokin, D.Y.; Yakimov, M.M.; Messina, E.; Merkel, A.Y.; Koenen, M.; Bale, N.J.; Sinninghe Damsté, J.S (2021). Halapricum desulfuricans sp. nov., carbohydrate-utilizing, sulfur-respiring haloarchaea from hypersaline lakes. Syst. Appl. Microbiol. 44(6): 126249. https://dx.doi.org/10.1016/j.syapm.2021.126249, meer Sorokin, D.Y.; Diender, M.; Merkel, A.Y.; Koenen, M.; Bale, N.J.; Pabst, M.; Sinninghe Damsté, J.S.; Sousa, D.Z. (2021). Natranaerofaba carboxydovora gen. nov., sp. nov., an extremely haloalkaliphilic CO‐utilizing acetogen from a hypersaline soda lake representing a novel deep phylogenetic lineage in the class ‘Natranaerobiia’. Environ. Microbiol. 23(7): 3460-3476. https://doi.org/10.1111/1462-2920.15241, meer Suominen, S.; Dombrowski, N.; Sinninghe Damsté, J.S; Villanueva, L. (2021). A diverse uncultivated microbial community is responsible for organic matter degradation in the Black Sea sulphidic zone. Environ. Microbiol. 23(6): 2709-2728. https://dx.doi.org/10.1111/1462-2920.14902, meer Suominen, S.; van Vliet, D.M.; Sánchez-Andrea, I.; van der Meer, M.T.J.; Sinninghe Damsté, J.S; Villanueva, L. (2021). Organic matter type defines the composition of active microbial communities originating from anoxic Baltic Sea sediments. Front. Microbiol. 12: 628301. https://doi.org/10.3389/fmicb.2021.628301, meer Suominen, S.; Doorenspleet; Sinninghe Damsté, J.S; Villanueva, L. (2021). Microbial community development on model particles in the deep sulfidic waters of the Black Sea. Environ. Microbiol. 23(6): 2729-2746. https://dx.doi.org/10.1111/1462-2920.15024, meer van Grinsven, S.; Sinninghe Damsté, J.S.; Harrison, J.; Polerecky, L.; Villanueva, L. (2021). Nitrate promotes the transfer of methane‐derived carbon from the methanotroph Methylobacter sp. to the methylotroph Methylotenera sp. in eutrophic lake water. Limnol. Oceanogr. 66(3): 878-891. https://doi.org/10.1002/lno.11648, meer van Vliet, D.M.; von Meijenfeldt, F.A.B.; Dutilh, B.E.; Villanueva, L.; Sinninghe Damsté, J.S; Stams, A.J.M.; Sánchez-Andrea, I. (2021). The bacterial sulfur cycle in expanding dysoxic and euxinic marine waters. Environ. Microbiol. 23(6): 2834-2857. https://doi.org/10.1111/1462-2920.15265, meer Villanueva, L.; von Meijenfeldt, F.A.B.; Westbye, A.B.; Yadav, S.; Hopmans, E.C.; Dutilh, B.E.; Sinninghe Damsté, J.S (2021). Bridging the membrane lipid divide: bacteria of the FCB group superphylum have the potential to synthesize archaeal ether lipids. ISME J. 15: 168-182. https://dx.doi.org/10.1038/s41396-020-00772-2, meer Yadav, S.; Koenen, M.; Bale, N.; Sinninghe Damsté, J.S.; Villanueva, L. (2021). The physiology and metabolic properties of a novel, low‐abundance Psychrilyobacter species isolated from the anoxic Black Sea shed light on its ecological role. Environmental Microbiology Reports 13(6): 899-910. https://dx.doi.org/10.1111/1758-2229.13012, meer Bale, N.J.; Koenen, M.; Yadav, S.; Hopmans, E.C.; Villanueva, L.; Sinninghe Damsté, J.S.; Schouten, S. (2020). Diagnostic amide products of amino lipids detected in the microaerophilic bacteria Lutibacter during routine fatty acid analysis using gas chromatography. Org. Geochem. 144: 104027. https://doi.org/10.1016/j.orggeochem.2020.104027, meer Besseling, M.A.; Hopmans, E.C.; Bale, N.J.; Schouten, S.; Sinninghe Damsté, J.S.; Villanueva, L. (2020). The absence of intact polar lipid-derived GDGTs in marine waters dominated by Marine Group II: Implications for lipid biosynthesis in Archaea. NPG Scientific Reports 10(1): 10 pp. https://dx.doi.org/10.1038/s41598-019-57035-0, meer de Bar, M.W.; Weiss, G.M.; Yildiz, C.; Rampen, S.W.; Lattaud, J.; Bale, N.J.; Mienis, F.; Brummer, G.-J. A.; Schulz, H.; Rush, D.; Kim, J.-H.; Donner, B.; Knies, J.; Lückge, A.; Stuut, J.-B.W.; Sinninghe Damsté, J.S; Schouten, S. (2020). Global temperature calibration of the Long chain Diol Index in marine surface sediments. Org. Geochem. 142: 103983. https://doi.org/10.1016/j.orggeochem.2020.103983, meer Dearing Crampton-Flood, E.; Tierney, J.E.; Peterse, F; Kirkels, F.M.S.A.; Sinninghe Damsté, J.S (2020). BayMBT: A Bayesian calibration model for branched glycerol dialkyl glycerol tetraethers in soils and peats. Geochim. Cosmochim. Acta 268: 142-159. https://dx.doi.org/10.1016/j.gca.2019.09.043, meer Dearing Crampton-Flood, E.; Noorbergen, L.J.; Smits, D.; Boschman, R.C.; Donders, T.H.; Munsterman, D.K.; ten Veen, J.H.; Peterse, F.; Lourens, L.; Sinninghe Damsté, J.S (2020). A new age model for the Pliocene of the southern North Sea basin: a multi-proxy climate reconstruction. Clim. Past 16(2): 523-541. https://dx.doi.org/10.5194/cp-16-523-2020, meer Dedysh, S.N.; Kulichevskaya, I.S.; Beletsky, A.V.; Ivanova, A.A.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Mardanov, A.V.; Ravin, N.V. (2020). Lacipirellula parvula gen. nov., sp. nov., representing a lineage of planctomycetes widespread in low-oxygen habitats, description of the family Lacipirellulaceae fam. nov. and proposal of the orders Pirellulales ord. nov., Gemmatales ord. nov. and Isosphaerales ord. nov. Syst. Appl. Microbiol. 43(1): 126050. https://dx.doi.org/10.1016/j.syapm.2019.126050, meer Kulichevskaya, I.S.; Naumoff, D.G.; Miroshnikov, K.K.; Ivanova, A.A.; Philippov, D.A.; Hakobyan, A.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S; Liesack, W.; Dedysh, S.N. (2020). Limnoglobus roseus gen. nov., sp. nov., a novel freshwater planctomycete with a giant genome from the family Gemmataceae. Int. J. Syst. Evol. Microbiol. 70(2): 1240-1249. https://dx.doi.org/10.1099/ijsem.0.003904, meer Kulichevskaya, I.S.; Ivanova, A.; Naumoff, D.G.; Beletsky, A.V.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Mardanov, A.V.; Ravin, N.V.; Dedysh, S.N. (2020). Frigoriglobus tundricola gen. nov., sp. nov., a psychrotolerant cellulolytic planctomycete of the family Gemmataceae from a littoral tundra wetland. Syst. Appl. Microbiol. 43(5): 126129. https://dx.doi.org/10.1016/j.syapm.2020.126129, meer Moros, M.; Kotilainen, A.T.; Snowball, I.; Neumann, T.; Perner, K.; Meier, H.E.M.; Leipe, T.; Zillén, Lovisa; Sinninghe Damsté, J.S; Schneider, R. (2020). Is ‘deep-water formation’ in the Baltic Sea a key to understanding seabed dynamics and ventilation changes over the past 7,000 years? Quaternary International 550: 55-65. https://dx.doi.org/10.1016/j.quaint.2020.03.031, meer Ozuolmez, D.; Moore, E.K.; Hopmans, E.C.; Sinninghe Damsté, J.S; Stams, A.J.M.; Plugge, C.M. (2020). Butyrate conversion by sulfate-reducing and methanogenic communities from anoxic sediments of Aarhus Bay, Denmark. Microorganisms 8(4): 606. https://dx.doi.org/10.3390/microorganisms8040606, meer Peng, P.; Goris, T.; Lu, Y.; Nijsse, B.; Burrichter, A.; Schleheck, D.; Koehorst, K.J.; Liu, J.; Sipkema, D.; Sinninghe Damsté, J.S (2020). Organohalide-respiring Desulfoluna species isolated from marine environments. ISME J. 14: 815-827. https://dx.doi.org/10.1038/s41396-019-0573-y, meer Saidi-Mehrabad, A.; Kits, D.K.; Kim, J.-J.; Tamas, I.; Schumann, P.; Khadka, R.; Strilets, T.; Smirnova, A.V.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S; Dunfield, P.F. (2020). Methylicorpusculum oleiharenae gen. nov., sp. nov., an aerobic methanotroph isolated from an oil sands tailings pond. Int. J. Syst. Evol. Microbiol. 70(4): 2499-2508. https://doi.org/10.1099/ijsem.0.004064, meer Scasso, R.A.; Prámparo, M.B.; Vellekoop, J.; Franzosi, C.; Castro, L.N.; Sinninghe Damsté, J.S (2020). A high-resolution record of environmental changes from a Cretaceous-Paleogene section of Seymour Island, Antarctica. Palaeogeogr. Palaeoclimatol. Palaeoecol. 555: 109844. https://dx.doi.org/10.1016/j.palaeo.2020.109844, meer Schwartz-Narbonne, R.; Schaeffer, P.; Hopmans, E.C.; Schenesse, M.; Alex Charlton, E.; Martin Jones, D.; Sinninghe Damsté, J.S.; Farhan Ul Haque, M.; Jetten, M.S.M.; Lengger, S.K. (2020). A unique bacteriohopanetetrol stereoisomer of marine anammox. Org. Geochem. 143: 103994. https://doi.org/10.1016/j.orggeochem.2020.103994, meer van Bree, L.G.J.; Peterse, F.; Baxter, A.J.; De Crop, W.; van Grinsven, S.; Villanueva, L.; Verschuren, D.; Sinninghe Damsté, J.S (2020). Seasonal variability and sources of in situ brGDGT production in a permanently stratified African crater lake. Biogeosciences 17(21): 5443-5463. https://doi.org/10.5194/bg-17-5443-2020, meer van Grinsven, S.; Sinninghe Damsté, J.S; Harrison, J.; Villanueva, L. (2020). Impact of electron acceptor availability on methane-influenced microorganisms in an enrichment culture obtained from a stratified lake. Front. Microbiol. 11: article 715. https://dx.doi.org/10.3389/fmicb.2020.00715, meer van Grinsven, S.; Sinninghe Damsté, J.S; Abdala Asbun, A.; Engelmann, J.C.; Harrison, J.; Villanueva, L. (2020). Methane oxidation in anoxic lake water stimulated by nitrate and sulfate addition. Environ. Microbiol. 22(2): 766-782. https://dx.doi.org/10.1111/1462-2920.14886, meer van Grinsven, S.; Sinninghe Damsté, J.S; Villanueva, L. (2020). Assessing the effect of humic substances and Fe(III) as potential electron acceptors for anaerobic methane oxidation in a marine anoxic system. Microorganisms 8(9): 1288. https://doi.org/10.3390/microorganisms8091288, meer van Winden, J.F.; Talbot, H.M.; Reichart, G.-J.; McNamara, N.P.; Benthien, A.; Sinninghe Damsté, J.S. (2020). Influence of temperature on the δ¹³C values and distribution of methanotroph‐related hopanoids in Sphagnum‐dominated peat bogs. Geobiol. 18(4): 497-507. https://dx.doi.org/10.1111/gbi.12389, meer Weiss, G.M.; Massalska, B.; Hennekam, R.; Reichart, G.-J.; Sinninghe Damsté, J.S; Schouten, S.; van der Meer, M.T.J. (2020). Alkenone distributions and hydrogen isotope ratios show changes in haptophyte species and source water in the Holocene Baltic Sea. Geochem. Geophys. Geosyst. 21(2): e2019GC008751. https://dx.doi.org/10.1029/2019gc008751, meer Witkowski, C.R.; van der Meer, M.T.J.; Smit, N.T.; Sinninghe Damsté, J.S.; Schouten, S. (2020). Testing algal-based pCO₂ proxies at a modern CO₂ seep (Vulcano, Italy). NPG Scientific Reports 10(1): 10508. https://dx.doi.org/10.1038/s41598-020-67483-8, meer Witkowski, C.R.; van der Meer, M.T.J.; Blais, B.; Sinninghe Damsté, J.S.; Schouten, S. (2020). Algal biomarkers as a proxy for pCO₂: Constraints from late quaternary sapropels in the eastern Mediterranean. Org. Geochem. 150: 104123. https://doi.org/10.1016/j.orggeochem.2020.104123, meer Yadav, S.; Villanueva, L.; Bale, N.; Koenen, M.; Hopmans, E.C.; Sinninghe Damsté, J.S (2020). Physiological, chemotaxonomic and genomic characterization of two novel piezotolerant bacteria of the family Marinifilaceae isolated from sulfidic waters of the Black Sea. Syst. Appl. Microbiol. 43(5): 126122. https://doi.org/10.1016/j.syapm.2020.126122, meer Bale, N.J.; Palatinszky, M.; Rijpstra, W.I.C.; Herbold, C.W.; Wagner, M.; Sinninghe Damsté, J.S (2019). Membrane lipid composition of the moderately thermophilic ammonia-oxidizing archaeon “Candidatus Nitrosotenuis uzonensis” at different growth temperatures. Appl. Environ. Microbiol. 85(20). https://dx.doi.org/10.1128/aem.01332-19, meer Bale, N.J.; Sorokin, D.Y.; Hopmans, E.C.; Koenen, M.; Rijpstra, W.I.C.; Villanueva, L.; Wienk, H.; Sinninghe Damsté, J.S. (2019). New insights into the polar lipid composition of extremely halo(alkali)philic euryarchaea from hypersaline lakes. Front. Microbiol. 10: article 377. https://dx.doi.org/10.3389/fmicb.2019.00377, meer Bale, N.J.; Hennekam, R.; Hopmans, E.C.; Dorhout, D.; Reichart, G.-J.; Van der Meer, M.T.J.; Villareal, T.A.; Sinninghe Damsté, J.S; Schouten, S. (2019). Biomarker evidence for nitrogen-fixing cyanobacterial blooms in a brackish surface layer in the Nile River plume during sapropel deposition. Geology (Boulder Colo.) 47(11): 1088-1092. https://dx.doi.org/10.1130/g46682.1, meer Bale, N.J.; Rijpstra, W.I.C.; Sahonero Canavesi, D.X.; Oshkin, I.Y.; Belova, S.E.; Dedysh, S.N.; Sinninghe Damsté, J.S (2019). Fatty acid and hopanoid adaption to cold in the methanotroph Methylovulum psychrotolerans. Front. Microbiol. 10: article 589. https://dx.doi.org/10.3389/fmicb.2019.00589, meer Balzano, S.; Villanueva, L.; de Bar, M.; Sahonero Canavesi, D.X.; Yildiz, C.; Engelmann, J.C.; Maréchal, E.; Lupette, J.; Sinninghe Damsté, J.S.; Schouten, S. (2019). Biosynthesis of long chain alkyl diols and long chain alkenols in Nannochloropsis spp. (Eustigmatophyceae). Plant Cell Physiol. 60(8): 1666-1682. https://dx.doi.org/10.1093/pcp/pcz078, meer Baxter, A.J.; Hopmans, E.C.; Russell, J.M.; Sinninghe Damsté, J.S (2019). Bacterial GMGTs in East African lake sediments: Their potential as palaeotemperature indicators. Geochim. Cosmochim. Acta 259: 155-169. https://dx.doi.org/10.1016/j.gca.2019.05.039, meer Besseling, M.A.; Hopmans, E.C.; Koenen, M.; van der Meer, M.T.J.; Vreugdenhil, S.; Schouten, S.; Sinninghe Damsté, J.S; Villanueva, L. (2019). Depth-related differences in archaeal populations impact the isoprenoid tetraether lipid composition of the Mediterranean Sea water column. Org. Geochem. 135: 16-31. https://dx.doi.org/10.1016/j.orggeochem.2019.06.008, meer de Bar, M.W.; Rampen, S.W.; Hopmans, E.C.; Sinninghe Damsté, J.S.; Schouten, S. (2019). Constraining the applicability of organic paleotemperature proxies for the last 90 Myrs. Org. Geochem. 128: 122-136. https://doi.org/10.1016/j.orggeochem.2018.12.005, meer de Bar, M.W.; Ullgren, J.E.; Thunnell, R.C.; Wakeham, S.G.; Brummer, G.-J. A.; Stuut, J.-B.W.; Sinninghe Damsté, J.S; Schouten, S. (2019). Long-chain diols in settling particles in tropical oceans: insights into sources, seasonality and proxies. Biogeosciences 16(8): 1705-1727. https://dx.doi.org/10.5194/bg-16-1705-2019, meer Dearing Crampton-Flood, E.; Peterse, F.; Sinninghe Damsté, J.S (2019). Production of branched tetraethers in the marine realm: Svalbard fjord sediments revisited. Org. Geochem. 138: 103907. https://dx.doi.org/10.1016/j.orggeochem.2019.103907, meer Etourneau, J.; Sgubin, G.; Crosta, X.; Swingedouw, D.; Willmott, V.; Barbara, L.; Houssais, M.-N.; Schouten, S.; Sinninghe Damsté, J.S.; Goosse, H.; Escutia, C.; Crespin, J.; Massé, G.; Kim, J.-H (2019). Ocean temperature impact on ice shelf extent in the eastern Antarctic Peninsula. Nature Comm. 10(article number: 304): 8 pp. https://dx.doi.org/10.1038/s41467-018-08195-6, meer Fletcher, T.L.; Warden, L.; Sinninghe Damsté, J.S.; Brown, K.J.; Rybczynski, N.; Gosse, J.C.; Ballantyne, A.P. (2019). Evidence for fire in the Pliocene Arctic in response to amplified temperature. Clim. Past 15(3): 1063-1081. https://dx.doi.org/10.5194/cp-15-1063-2019, meer Frieling, J.; Peterse, F.; Lunt, D.J.; Bohaty, S.M.; Sinninghe Damsté, J.S.; Reichart, G.-J.; Sluijs, A. (2019). Widespread warming before and elevated barium burial during the Paleocene‐Eocene Thermal Maximum: Evidence for methane hydrate release? Paleoceanography and Paleoclimatology 34(4): 546-566. https://dx.doi.org/10.1029/2018pa003425, meer Gale, A.S.; Jenkyns, H.C.; Tsikos, H.; van Breugel, Y.; Sinninghe Damsté, J.S.; Bottini, C.; Erba, E.; Russo, F.; Falzoni, F.; Petrizzo, M.R.; Dickson, A.J.; Wray, D.S. (2019). High-resolution bio- and chemostratigraphy of an expanded record of Oceanic Anoxic Event 2 (Late Cenomanian–Early Turonian) at Clot Chevalier, near Barrême, SE France (Vocontian Basin). Newsl. Stratigr. 52(1): 97-129. https://doi.org/10.1127/nos/2018/0445, meer Lattaud, J.; Lo, L.; Zeeden, C.; Liu, Y.-J.; Song, S.-R.; Van der Meer, M.T.J.; Sinninghe Damsté, J.S.; Schouten, S. (2019). A multiproxy study of past environmental changes in the Sea of Okhotsk during the last 1.5 Ma. Org. Geochem. 132: 50-61. https://dx.doi.org/10.1016/j.orggeochem.2019.04.003, meer Lattaud, J.; Erdem, Z.; Weiss, G.M.; Rush, D.; Balzano, S.; Chivall, D.; van der Meer, M.T.J.; Hopmans, E.C.; Sinninghe Damsté, J.S; Schouten, S. (2019). Hydrogen isotopic ratios of long-chain diols reflect salinity. Org. Geochem. 137: 103904. https://dx.doi.org/10.1016/j.orggeochem.2019.103904, meer Lengger, S.K.; Rush, D.; Mayser, J.P.; Blewett, J.; Schwartz-Narbonne, R.; Talbot, H.M.; Middelburg, J.J.; Jetten, M.S.M.; Schouten, S.; Sinninghe Damsté, J.S. (2019). Dark carbon fixation in the Arabian Sea oxygen minimum zone contributes to sedimentary organic carbon (SOM). Global Biogeochem. Cycles 33(12): 1715-1732. https://dx.doi.org/10.1029/2019gb006282, meer Meegan Kumar, D.; Woltering, M.; Hopmans, E.C.; Sinninghe Damsté, J.S; Schouten, S.; Werne, J.P. (2019). The vertical distribution of Thaumarchaeota in the water column of Lake Malawi inferred from core and intact polar tetraether lipids. Org. Geochem. 132: 37-49. https://dx.doi.org/10.1016/j.orggeochem.2019.03.004, meer Oshkin, I.Y.; Kulichevskaya, I.S.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Rakitin, A.L.; Ravin, N.V.; Dedysh, S.N. (2019). Granulicella sibirica sp. nov., a psychrotolerant acidobacterium isolated from an organic soil layer in forested tundra, West Siberia. Int. J. Syst. Evol. Microbiol. 69(4): 1195-1201. https://dx.doi.org/10.1099/ijsem.0.003290, meer Rush, D.; Talbot, H.M.; Van der Meer, M.T.J.; Hopmans, E.C.; Douglas, B.; Sinninghe Damsté, J.S (2019). Biomarker evidence for the occurrence of anaerobic ammonium oxidation in the eastern Mediterranean Sea during Quaternary and Pliocene sapropel formation. Biogeosciences 16(12): 2467-2479. https://dx.doi.org/10.5194/bg-16-2467-2019, meer Schreuder, L.T.; Donders, T.H.; Mets, A.; Hopmans, E.C.; Sinninghe Damsté, J.S; Schouten, S. (2019). Comparison of organic and palynological proxies for biomass burning and vegetation in a lacustrine sediment record (Lake Allom, Fraser Island, Australia). Org. Geochem. 133: 10-19. https://dx.doi.org/10.1016/j.orggeochem.2019.03.002, meer Schreuder, L.T.; Hopmans, E.C.; Castañeda, I.S.; Schefuß, E.; Mulitza, S.; Sinninghe Damsté, J.S.; Schouten, S. (2019). Late Quaternary biomass burning in Northwest Africa and interactions with climate, vegetation, and humans. Paleoceanography and Paleoclimatology 34(2): 153-163. https://dx.doi.org/10.1029/2018PA003467, meer Smit, N.T.; Rush, D.; Sahonero Canavesi, D.X.; Verweij, M.; Rasigraf, O.; Guerrero-Cruz, S.; Jetten, M.S.M.; Sinninghe Damsté, J.S; Schouten, S. (2019). Demethylated hopanoids in ‘Ca. Methylomirabilis oxyfera’ as biomarkers for environmental nitrite-dependent methane oxidation. Org. Geochem. 137: 103899. https://dx.doi.org/10.1016/j.orggeochem.2019.07.008, meer Sollai, M.; Villanueva, L.; Hopmans, E.C.; Keil, R.G.; Sinninghe Damsté, J.S. (2019). Archaeal sources of intact membrane lipid biomarkers in the oxygen deficient zone of the eastern tropical South Pacific. Front. 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Natrarchaeobius chitinivorans gen. nov., sp. nov., and Natrarchaeobius halalkaliphilus sp. nov., alkaliphilic, chitin-utilizing haloarchaea from hypersaline alkaline lakes. Syst. Appl. Microbiol. 42(3): 309-318. https://dx.doi.org/10.1016/j.syapm.2019.01.001, meer Sorokin, D.Y.; Yakimov, M.; Messina, E.; Merkel, A.Y.; Bale, N.J.; Sinninghe Damsté, J.S. (2019). Natronolimnobius sulfurireducens sp. nov. and Halalkaliarchaeum desulfuricum gen. nov., sp. nov., the first sulfur-respiring alkaliphilic haloarchaea from hypersaline alkaline lakes. Int. J. Syst. Evol. Microbiol. 69(9): 2662-2673. https://dx.doi.org/10.1099/ijsem.0.003506, meer van Maldegem, L.M.; Sansjofre, P.; Weijers, J.W.H.; Wolkenstein, K.; Strother, P.K.; Wörmer, L.; Hefter, J.; Nettersheim, B.J.; Hoshino, Y.; Schouten, S.; Sinninghe Damsté, J.S.; Nath, N.; Griesinger, C.; Kuznetsov, N.B.; Elie, M.; Elvert, M.; Tegelaar, E.; Gleixner, G.; Hallmann, C. (2019). Bisnorgammacerane traces predatory pressure and the persistent rise of algal ecosystems after Snowball Earth. Nature Comm. 10(1): 476. https://dx.doi.org/10.1038/s41467-019-08306-x, meer Weiss, G.M.; Schouten, S.; Sinninghe Damsté, J.S; Van der Meer, M.T.J. (2019). Constraining the application of hydrogen isotopic composition of alkenones as a salinity proxy using marine surface sediments. Geochim. Cosmochim. Acta 250: 34-48. https://doi.org/10.1016/j.gca.2019.01.038, meer Weiss, G.M.; Roepert, A.; Middelburg, J.J.; Schouten, S.; Sinninghe Damsté, J.S; van der Meer, M.T.J. (2019). Hydrogen isotope fractionation response to salinity and alkalinity in a calcifying strain of Emiliania huxleyi. Org. Geochem. 134: 62-65. https://dx.doi.org/10.1016/j.orggeochem.2019.06.001, meer Weiss, G.M.; de Bar, M.W.; Stolwijk, D.J.; Schouten, S.; Sinninghe Damsté, J.S.; van der Meer, M.T.J. (2019). Paleosensitivity of hydrogen isotope ratios of long‐chain alkenones to salinity changes at the Chile Margin. Paleoceanography and Paleoclimatology 34(6): 978-989. https://dx.doi.org/10.1029/2019pa003591, meer Witkowski, C.R.; Agostini, S.; Harvey, B.P.; van der Meer, M.T.J.; Sinninghe Damsté, J.S.; Schouten, S. (2019). Validation of carbon isotope fractionation in algal lipids as a pCO₂ proxy using a natural CO₂ seep (Shikine Island, Japan). Biogeosciences 16(22): 4451-4461. https://dx.doi.org/10.5194/bg-16-4451-2019, meer Bale, N.J.; Hopmans, E.C.; Dorhout, D.; Stal, L.J.; Grego, M.; van Bleijswijk, J.D.L.; Sinninghe Damsté, J.S.; Schouten, S. (2018). A novel heterocyst glycolipid detected in a pelagic N₂ -fixing cyanobacterium of the genus Calothrix. Org. Geochem. 123: 44-47. https://doi.org/10.1016/j.orggeochem.2018.06.009, meer Bale, N.J.; Villareal, T.A.; Hopmans, E.C.; Brussaard, C.P.D.; Besseling, M.; Dorhout, D.; Sinninghe Damsté, J.S.; Schouten, S. (2018). C₅ glycolipids of heterocystous cyanobacteria track symbiont abundance in the diatom Hemiaulus hauckii across the tropical North Atlantic. Biogeosciences 15(4): 1229-1241. https://dx.doi.org/10.5194/bg-15-1229-2018, meer Balzano, S.; Lattaud, J.; Villanueva, L.; Rampen, S.W.; Brussaard, C.P.D.; van Bleijswijk, J.; Bale, N.; Sinninghe Damsté, J.S.; Schouten, S. (2018). A quest for the biological sources of long chain alkyl diols in the western tropical North Atlantic Ocean. Biogeosciences 15(19): 5951-5968. https://doi.org/10.5194/bg-15-5951-2018, meer Belova, S.E.; Ravin, N.V.; Pankratov, T.A.; Rakitin, A.L.; Ivanova, A.; Beletsky, A.V.; Mardanov, A.V.; Sinninghe Damsté, J.S.; Dedysh, S.N. (2018). Hydrolytic capabilities as a key to environmental success: chitinolytic and cellulolytic Acidobacteria from acidic sub-arctic soils and boreal peatlands. Front. 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Using tetraether lipids archived in North Sea Basin sediments to extract North Western European Pliocene continental air temperatures. Earth Planet. Sci. Lett. 490: 193-205. https://dx.doi.org/10.1016/j.epsl.2018.03.030, meer Dessandier, P.-A.; Bonnin, J.; Malaizéa, B.; Lambert, C.; Tjallingii, R.; Warden, L.; Sinninghe Damsté, J.S.; Kim, J.-H (2018). Variations in benthic foraminiferal assemblages in the Tagus mud belt during the last 5700 years: Implications for Tagus River discharge. Palaeogeogr. Palaeoclimatol. Palaeoecol. 496: 225-237. https://doi.org/10.1016/j.palaeo.2018.01.040, meer Donders, T.H.; van Helmond, N.A.G.M.; Verreussel, R.; Munsterman, D.; ten Veen, J.; Speijer, R.P.; Weijers, J.W.H.; Sangiorgi, F.; Peterse, F.; Reichart, G.-J.; Sinninghe Damsté, J.S.; Lourens, L.; Kuhlmann, G.; Brinkhuis, H. (2018). Land–sea coupling of early Pleistocene glacial cycles in the southern North Sea exhibit dominant Northern Hemisphere forcing. Clim. 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Long-chain diols in rivers: distribution and potential biological sources. Biogeosciences 15(13): 4147-4161. https://doi.org/10.5194/bg-15-4147-2018, meer Lipsewers, Y.A.; Hopmans, E.C.; Sinninghe Damsté, J.S.; Villanueva, L. (2018). Potential recycling of thaumarchaeotal lipids by DPANN Archaea in seasonally hypoxic surface marine sediments. Org. Geochem. 119: 101-109. https://dx.doi.org/10.1016/j.orggeochem.2017.12.007, meer Reiche, S.; Rampen, S.W.; Dorhout, D.J.C.; Sinninghe Damsté, J.S.; Schouten, S. (2018). The impact of oxygen exposure on long-chain alkyl diols and the long chain diol index (LDI) – a long-term incubation study. Org. Geochem. 124: 238-246. https://doi.org/10.1016/j.orggeochem.2018.08.003, meer Rochman, F.; Kim, J.-J.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Schumann, P.; Verbeke, T.J.; Dunfield, P.F. (2018). Oleiharenicola alkalitolerans gen. nov., sp. nov., a new member of the phylum Verrucomicrobia isolated from an oilsands tailings pond. Int. J. Syst. Evol. 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Natronobiforma cellulositropha gen. nov., sp. nov., a novel haloalkaliphilic member of the family Natrialbaceae (class Halobacteria) from hypersaline alkaline lakes. Syst. Appl. Microbiol. 41(4): 355-362. https://dx.doi.org/10.1016/j.syapm.2018.04.002, meer Sorokin, D.Y.; Merkel, A.Y.; Abbas, B.; Makarova, K.S.; Rijpstra, W.I.C.; Koenen, M.; Sinninghe Damsté, J.S.; Galinski, E.A.; Koonin, E.V.; van Loosdrecht, M.C.M. (2018). Methanonatronarchaeum thermophilum gen. nov., sp. nov. and 'Candidatus Methanohalarchaeum thermophilum', extremely halo(natrono)philic methyl-reducing methanogens from hypersaline lakes comprising a new euryarchaeal class Methanonatronarchaeia classis nov. Int. J. Syst. Evol. Microbiol. 68(7): 2199-2208. https://doi.org/10.1099/ijsem.0.002810, meer Steinle, L.; Knittel, K.; Felber, N.; Casalino, C.; de Lange, G.; Tessarolo, C.; Stadnitskaia, A.; Sinninghe Damsté, J.S.; Zopfi, J.; Lehmann, M.F.; Treude, T.; Niemann, H. (2018). Life on the edge: active microbial communities in the Kryos MgCl₂-brine basin at very low water activity. ISME J. 12(6): 1414-1426. https://dx.doi.org/10.1038/s41396-018-0107-z, meer Timmers, P.H.A.; Vavourakis, C.D.; Kleerebezem, R.; Sinninghe Damsté, J.S; Muyzer, G.; Stams, A.J.M.; Sorokin, D.Y.; Plugge, C.M. (2018). Metabolism and occurrence of methanogenic and sulfate-reducing syntrophic acetate oxidizing communities in haloalkaline environments. Front. Microbiol. 9(3039). https://dx.doi.org/10.3389/fmicb.2018.03039, meer van Bree, L.G.J.; Peterse, F.; van der Meer, M.T.J.; Middelburg, J.J.; Negash, A.M.D.; De Crop, W.; Cocquyt, C.; Wieringa, J.J.; Verschuren, D.; Sinninghe Damsté, J.S. (2018). Seasonal variability in the abundance and stable carbon-isotopic composition of lipid biomarkers in suspended particulate matter from a stratified equatorial lake (Lake Chala, Kenya/Tanzania): Implications for the sedimentary record. Quat. Sci. 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Tundrisphaera lichenicola gen. nov., sp. nov., a psychrotolerant representative of the family Isosphaeraceae from lichen-dominated tundra soils. Int. J. Syst. Evol. Microbiol. 67(9): 3583-3589. https://dx.doi.org/10.1099/ijsem.0.002172, meer Lattaud, J.; Kim, J.-H; de Jonge, C.; Zell, C.; Sinninghe Damsté, J.S.; Schouten, S. (2017). The C₃₂ alkane-1,15-diol as a tracer for riverine input in coastal seas. Geochim. Cosmochim. Acta 202: 146-158. https://dx.doi.org/10.1016/j.gca.2016.12.030, meer Lattaud, J.; Dorhout, D.; Schulz, H.; Castañeda, I.S.; Schefuß, E.; Sinninghe Damsté, J.S.; Schouten, S. (2017). The C₃₂ alkane-1,15-diol as a proxy of late Quaternary riverine input in coastal margins. Clim. Past 13(8): 1049-1061. https://doi.org/10.5194/cp-13-1049-2017, meer Le Guitton, M.; Soetaert, K.; Sinninghe Damsté, J.S.; Middelburg, J.J. (2017). A seasonal study of particulate organic matter composition and quality along an offshore transect in the southern North Sea. 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Effects of alkalinity and salinity at low and high light intensity on hydrogen isotope fractionation of long-chain alkenones produced by Emiliania huxleyi. Biogeosciences 14(24): 5693-5704. https://dx.doi.org/10.5194/bg-14-5693-2017, meer Dessandier, P.-A.; Bonnin, J.; Kim, J.-H.; Bichona, S.; Deflandre, B.; Grémare, A.; Sinninghe Damsté, J.S. (2016). Impact of organic matter source and quality on living benthic foraminiferal distribution on a river-dominated continental margin: A study of the Portuguese Margin. J. Geophys. Res. 121(6): 1689–1714. dx.doi.org/10.1002/2015JG003231, meer Bale, N.J.; Hopmans, E.C.; Schoon, P.; de Kluijver, A.; Downing, J.A.; Middelburg, J.J.; Sinninghe Damsté, J.S.; Schouten, S. (2016). Impact of trophic state on the distribution of intact polar lipids in surface waters of lakes. Limnol. Oceanogr. 61(3): 1065–1077. dx.doi.org/10.1002/lno.10274, meer Buckles, L.K.; Verschuren, D.; Weijers, J.W.H.; Cocquyt, C.; Blaauw, M.; Sinninghe Damsté, J.S. (2016). Interannual and (multi-)decadal variability in the sedimentary BIT index of Lake Challa, East Africa, over the past 2200 years: assessment of the precipitation proxy. Clim. Past 12: 1243-1262. dx.doi.org/10.5194/cp-12-1243-2016, meer de Bar, M.W.; Dorhout, D.J.C.; Hopmans, E.C.; Rampen, S.W.; Sinninghe Damste, J.S.; Schouten, S. (2016). Constraints on the application of long chain diol proxies in the Iberian Atlantic margin. Org. Geochem. 10: 184–195. dx.doi.org/10.1016/j.orggeochem.2016.09.005, meer de Jonge, C.; Talbot, H.M.; Bischoff, J.; Cherkashov, G.; Sinninghe Damsté, J.S. (2016). Bacteriohopanepolyol distribution in Yenisei River and Kara Sea suspended particulate matter and sediments traces terrigenous organic matter input. Geochim. Cosmochim. Acta 174: 85–101. dx.doi.org/10.1016/j.gca.2015.11.008, meer de Jonge, C.; Stadnitskaia, Alina; Cherkashov, G.; Sinninghe Damsté, J.S. (2016). 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A progressively wetter climate in southern East Africa over the past 1.3 million years. Nature (Lond.) 537(7619): 220-224. dx.doi.org/10.1038/nature19065, meer Jung, M.Y.; Kim, J.G.; Sinninghe Damsté, J.S.; Rijpstra, W.I.C.; Madsen, E.L.; Kim, S.J.; Hong, H.; Si, O.-J.; Kerou, M.; Schleper, C.; Rhee, S.K. (2016). A hydrophobic ammonia-oxidizing archaeon of the Nitrosocosmicus clade isolated from coal tar-contaminated sediment. Environmental Microbiology Reports 8(6): 983–992. dx.doi.org/10.1111/1758-2229.12477, meer Kandiano, E.S.; Van der Meer, M.T.J.; Bauch, H.A.; Helmke, J.; Sinninghe Damsté, J.S.; Schouten, S. (2016). A cold and fresh ocean surface in the Nordic Seas during MIS 11: Significance for the future ocean. Geophys. Res. Lett. 43(20): 10,929–10,937. https://dx.doi.org/10.1002/2016GL070294, meer Kim, J.G.; Park, S.J.; Sinninghe Damsté, J.S.; Schouten, S.; Rijpstra, W.I.C.; Jung, M.Y.; Kim, S.J.; Gwak, J.-H.; Hong, H.; Si, O.-J.; Lee, S.H.; Madsen, E.L.; Rhee, S.K. (2016). 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Abundance and diversity of denitrifying and anammox bacteria in seasonally hypoxic and sulfidic sediments of the saline Lake Grevelingen. Front. Microbiol. 7: 1661. https://dx.doi.org/10.3389/fmicb.2016.01661, meer Maat, D.; Bale, N.J.; Hopmans, E.C.; Sinninghe Damsté, J.S.; Schouten, S.; Brussaard, C.P.D. (2016). Increasing P limitation and viral infection impact lipid remodeling of the picophytoplankter Micromonas pusilla. Biogeosciences 13(5): 1667-1676. http://dx.doi.org/10.5194/bg-13-1667-2016, meer Mao, J.; Nierop, K.G.J.; Rietkerk, M.; Sinninghe Damsté, J.S.; Dekker, S.C. (2016). The influence of vegetation on soil water repellency-markers and soil hydrophobicity. Sci. Total Environ. 566-567: 608-620. dx.doi.org/10.1016/j.scitotenv.2016.05.077, meer Moore, E.K.; Hopmans, E.C.; Rijpstra, W.I.C.; Villanueva, L.; Sinninghe Damsté, J.S. (2016). Elucidation and identiﬁcation of amino acid containing membrane lipids using liquid chromatography/high-resolution mass spectrometry. Rapid Comm. Mass Spectrom. 30(6): 739–750. dx.doi.org/10.1002/rcm.7503, meer Nieto-Moreno, V.; Rohrmann, A.; van der Meer, M.T.J.; Sinninghe Damsté, J.S.; Sachse, D.; Tofelde, S.; Niedermeyer, E.M.; Strecker, M.R.; Mulch, A. (2016). Elevation-dependent changes in n-alkane δD and soil GDGTs across the South Central Andes. Earth Planet. Sci. Lett. 453: 234–242. dx.doi.org/10.1016/j.epsl.2016.07.049, meer Oshkin, I.Y.; Belova, S.E.; Danilova, O.V.; Miroshnikov, K.K.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Liesack, W.; Dedysh, S.N. (2016). Methylovulum psychrotolerans sp. nov., a cold-adapted methanotroph from low-temperature terrestrial environments and emended description of the genus Methylovulum. Int. J. Syst. Evol. Microbiol. 66: 2417-2423. dx.doi.org/ 10.1099/ijsem.0.001046 , meer Rodrigo-Gámiz, M.; Rampen, S.W.; Schouten, S.; Sinninghe Damsté, J.S. (2016). The impact of oxic degradation on long chain alkyl diol distributions in Arabian Sea surface sediments. Org. 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Phenotypic and Genomic Properties of Chitinispirillum alkaliphilum gen. nov., sp. nov., A Haloalkaliphilic Anaerobic Chitinolytic Bacterium Representing a Novel Class in the Phylum Fibrobacteres. Front. Microbiol. 7: 407. dx.doi.org/10.3389/fmicb.2016.00407, meer Svensson, E.; Schouten, S.; Hopmans, E.C.; Middelburg, J.J.; Sinninghe Damsté, J.S. (2016). Factors Controlling the Stable Nitrogen Isotopic Composition (δ15N) of Lipids in Marine Animals. PLoS One 11(1): e0146321. https://dx.doi.org/10.1371/journal.pone.0146321, meer van Bree, L.G.J.; Rijpstra, W.I.C.; Al-Dhabi, N.A.; Verschuren, D.; Sinninghe Damsté, J.S.; de Leeuw, J.W. (2016). Des-A-lupane in an East African lake sedimentary record as a new proxy for the stable carbon isotopic composition of C₃ plants. Org. Geochem. 101: 132–139. dx.doi.org/10.1016/j.orggeochem.2016.09.003, meer van Soelen, E.; Ohkouchi, N.; Suga, H.; Sinninghe Damsté, J.S.; Reichart, G.-J. (2016). A late Holocene molecular hydrogen isotope record of the East Asian Summer Monsoon in Southwest Japan. Quatern. Res. 86(3): 287–294. dx.doi.org/10.1016/j.yqres.2016.07.005, meer Vellekoop, J.; Esmeray-Senlet, S.; Miller, K.G.; Browning, J.V.; Sluijs, A.; van de Schootbrugge, B.; Sinninghe Damsté, J.S.; Brinkhuis, H. (2016). Evidence for Cretaceous-Paleogene boundary bolide “impact winter” conditions from New Jersey, USA. Geology (Boulder Colo.) 44(8): 619-622. https://dx.doi.org/10.1130/G37961.1, meer Warden, L.; Kim, J.-H; Zell, C.; Vis, G.-J.; de Stigter, H.C.; Bonnin, J.; Sinninghe Damste, J.S. (2016). Examining the provenance of branched GDGTs in the Tagus River drainage basin and its outflow into the Atlantic Ocean over the Holocene to determine their usefulness for paleoclimate applications. Biogeosciences 13: 5719-5738. dx.doi.org/10.5194/bg-13-5719-2016, meer Warden, L.; Van der Meer, M.T.J.; Moros, M.; Sinninghe Damsté, J.S. (2016). Sedimentary alkenone distributions reflect salinity changes in the Baltic Sea over the Holocene. Org. Geochem. 102: 30–44. dx.doi.org/10.1016/j.orggeochem.2016.09.007, meer Bale, N.; Hopmans, E.C.; Zell, C.; Sobrinho, R.; Kim, J.H.; Sinninghe Damsté, J.S.; Villareal, T.A.; Schouten, S. (2015). Long chain glycolipids with pentose head groups as biomarkers for marine endosymbiotic heterocystous cyanobacteria. Org. Geochem. 81: 1-7. https://dx.doi.org/10.1016/j.orggeochem.2015.01.004, meer Bale, N.J.; Maat, D.S.; Hopmans, E.C.; Mets, A.; Sinninghe Damsté, J.S.; Brussaard, C.P.D.; Schouten, S. (2015). Fatty acid dynamics during viral infection of Phaeocystis globosa. Aquat. Microb. Ecol. 74: 85–94. dx.doi.org/10.3354/ame01730, meer Bottini, C.; Erba, E.; Tiraboschi, D.; Jenkyns, H.C.; Schouten, S.; Sinninghe Damsté, J.S. (2015). Climate variability and ocean fertility during the Aptian Stage. Clim. 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Comparison of the effect of salinity on the D/H ratio of fatty acids of heterotrophic and photoautotrophic microorganisms. FEMS Microbiol. Lett. 362(10). dx.doi.org/10.1093/femsle/fnv065, meer Heinzelmann, S.M.; Villanueva, L. ; Sinke-Schoen, D.; Sinninghe Damsté, J.S.; Schouten, S.; Van der Meer, M.T.J. (2015). Impact of metabolism and growth phase on the hydrogen isotopic composition of microbial fatty acids. Front. Microbiol. 6: 408. dx.doi.org/10.3389/fmicb.2015.00408, meer Kaiser, J.; Schouten, S.; Kilian, R.; Arz, H.W.; Lamy, F.; Sinninghe Damsté, J.S. (2015). Isoprenoid and branched GDGT-based proxies for surface sediments from marine, fjord and lake environments in Chile. Org. Geochem. 89-90: 117-127. dx.doi.org/10.1016/j.orggeochem.2015.10.007, meer Kasper, S.; van der Meer, M.T.J.; Castañeda, I.S; Tjallingii, R.; Brummer, G.J.A.; Sinninghe Damsté, J.S.; Schouten, S. (2015). Testing the alkenone D/H ratio as a paleo indicator of sea surface salinity in a coastal ocean margin (Mozambique Channel). Org. Geochem. 78: 62-68. dx.doi.org/10.1016/j.orggeochem.2014.10.011, meer Kim, J.H.; Schouten, S.; Rodrigo-Gámiz, M.; Rampen, S.W.; Marino, G.; Huguet, C.; Helmke, P.; Buscail, R.; Hopmans, E.C.; Pross, J.; Sangiorgi, F.; Middelburg, J.; Sinninghe Damsté, J.S. (2015). Influence of deep-water derived isoprenoid tetraether lipids on the TEX ^h ₈₆ paleothermometer in the Mediterranean Sea. Geochim. Cosmochim. Acta 150: 125–141. dx.doi.org/10.1016/j.gca.2014.11.017, meer Kim, J.-H.; Ludwig, W.; Buscail, R.; Dorhout, D.; Sinninghe Damsté, J.S. (2015). Tracing tetraether lipids from source to sink in the Rhône River system (NW Mediterranean). Front. Earth Sci. 3: 22. https://dx.doi.org/10.3389/feart.2015.00022, meer Kulichevskaya, I.S.; Ivanova, A.; Detkova, E.N.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Dedysh, S.N. (2015). Planctomicrobium piriforme gen. nov., sp. nov., a stalked planctomycete from a littoral wetland of a boreal lake. Int. J. Syst. Evol. Microbiol. 65(5): 1659-1665. dx.doi.org/10.1099/ijs.0.000154 , meer Le Guitton, M.; Soetaert, K.; Sinninghe Damsté, J.S.; Middelburg, J.J. (2015). Biogeochemical consequences of vertical and lateral transport of particulate organic matter in the southern North Sea: A multiproxy approach. Est., Coast. and Shelf Sci. 165: 117-127. https://dx.doi.org/10.1016/j.ecss.2015.09.010, meer Moore, E.K.; Villanueva, L.; Hopmans, E.C.; Rijpstra, W.I.C.; Mets, A.; Dedysh, S.N.; Sinninghe Damsté, J.S. (2015). Abundant Trimethylornithine Lipids and Specific Gene Sequences Are Indicative of Planctomycete Importance at the Oxic/Anoxic Interface in Sphagnum-Dominated Northern Wetlands. Appl. Environ. 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A continental-weathering control on orbitally driven redox-nutrient cycling during Cretaceous Oceanic Anoxic Event 2. Geology (Boulder Colo.) 43(11): 963–966. dx.doi.org/10.1130/G36837.1 , meer Rodrigo-Gámiz, M.; Rampen, S.W.; de Haas, H.; Baas, M.; Schouten, S.; Sinninghe Damsté, J.S. (2015). Constraints on the applicability of the organic temperature proxies U^k'₃₇, TEX₈₆ and LDI in the subpolar region around Iceland. Biogeosciences 12(22). dx.doi.org/10.5194/bg-12-6573-2015, meer Schoon, P.L.; Heilmann-Clausen, C.; Schultz, B.P.; Sinninghe Damsté, J.S.; Schouten, S. (2015). Warming and environmental changes in the eastern North Sea Basin during the Palaeocene–Eocene Thermal Maximum as revealed by biomarker lipids. Org. Geochem. 78: 79–88. dx.doi.org/10.1016/j.orggeochem.2014.11.003, meer Sollai, M.; Hopmans, E.C.; Schouten, S.; Keil, R.G.; Sinninghe Damsté, J.S. (2015). Intact polar lipids of Thaumarchaeota and anammox bacteria as indicators of N cycling in the eastern tropical North Pacific oxygen-deficient zone. Biogeosciences 12: 4725-4737. dx.doi.org/10.5194/bg-12-4725-2015, meer Sorokin, D.Y.; Abbas, B.; Merkel, A.Y; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Sukhacheva, M.V; van Loosdrecht, M.C.M. (2015). Methanosalsum natronophilum sp. nov., and Methanocalculus alkaliphilus sp. nov., haloalkaliphilic methanogens from hypersaline soda lakes. Int. J. Syst. Evol. Microbiol. 65: 3739-3745. dx.doi.org/10.1099/ijsem.0.000488, meer Svensson, E.; Schouten, S.; Stam, A.; Middelburg, J.J.; Sinninghe Damsté, J.S. (2015). Compound-specific stable isotope analysis of nitrogen-containing intact polar lipids. Rapid Comm. Mass Spectrom. 29(23): 2263–2271. dx.doi.org/10.1002/rcm.7393, meer van der Meer, M.T.J.; Benthien, A.; French, K.L.; Epping, E.; Zondervan, I.; Reichart, G.J.; Bijma, J.; Sinninghe Damsté, J.S.; Schouten, S. (2015). Large effect of irradiance on hydrogen isotope fractionation of alkenones in Emiliania huxleyi. Geochim. Cosmochim. Acta 160: 16-24. dx.doi.org/10.1016/j.gca.2015.03.024, meer van Helmond, N.A.G.M.; Sluijs, A.; Sinninghe Damsté, J.S.; Reichart, G.-J.; Voigt, S.; Erbacher, J.; Pross, J.; Brinkhuis, H. (2015). Freshwater discharge controlled deposition of Cenomanian–Turonian black shales on the NW European epicontinental shelf (Wunstorf, northern Germany). Clim. Past 11: 495-508. dx.doi.org/10.5194/cp-11-495-2015, meer Vasiliev, I.; Reichart, G.-J.; Grothe, A.; Sinninghe Damsté, J.S.; Krijgsman, W.; Sangiorgi, F.; Weijers, J.W.H; van Róij, L. (2015). Recurrent phases of drought in the upper Miocene of the Black Sea region. Palaeogeogr. Palaeoclimatol. Palaeoecol. 423: 18-31. dx.doi.org/10.1016/j.palaeo.2015.01.020, meer Vellekoop, J.; Smit, J.; van de Schootbrugge, B.; Weijers, J.W.; Galeotti, S.; Sinninghe Damsté, J.S.; Brinkhuis, H. (2015). Palynological evidence for prolonged cooling along the Tunisian continental shelf following the K–Pg boundary impact. Palaeogeogr. Palaeoclimatol. Palaeoecol. 426: 216-228. http://dx.doi.org/10.1016/j.palaeo.2015.03.021, meer Villanueva, L. ; Schouten, S.; Sinninghe Damsté, J.S. (2015). Depth-related distribution of a key gene of the tetraether lipid biosynthetic pathway in marine Thaumarchaeota. Environ. Microbiol. 17(10): 3527–3539. dx.doi.org/10.1111/1462-2920.12508, meer Zell, C.; Kim, J-H; Dorhout, D.; Baas, M.; Baas, M.; Sinninghe Damsté, J.S. (2015). Sources and distributions of branched tetraether lipids and crenarchaeol along the Portuguese continental margin: Implications for the BIT index. Cont. Shelf Res. 96: 34-44. dx.doi.org/10.1016/j.csr.2015.01.006, meer Bale, N.; Villanueva, L.; Fan, H.; Hopmans, E.C.; Schouten, S.; Sinninghe Damsté, J.S.; Stal, L.J. (2014). Occurrence and activity of anammox bacteria in surface sediments of the southern North Sea. FEMS Microbiol. Ecol. 89(1): 99–110. http://dx.doi.org/10.1111/1574-6941.12338, meer Berke, M.A.; Johnson, T.C.; Werne, J.P.; Livingstone, D.R.; Grice, K.; Schouten, S.; Sinninghe Damsté, J.S. (2014). Characterization of the last deglacial transition in tropical East Africa: Insights from Lake Albert. Palaeogeogr. Palaeoclimatol. Palaeoecol. 409: 1-8. http://dx.doi.org/10.1016/j.palaeo.2014.04.014, meer Buckles, L.K.; Weijers, J.W.H.; Tran, X.-M.; Waldron, S.; Sinninghe Damsté, J.S. (2014). Provenance of tetraether membrane lipids in a large temperate lake (Loch Lomond, UK): implications for glycerol dialkyl glycerol tetraether (GDGT)-based palaeothermometry. Biogeosciences 11: 5539-5563. dx.doi.org/10.5194/bg-11-5539-2014, meer Buckles, L.K.; Weijers, J.W.H.; Verschuren, D.; Sinninghe Damsté, J.S. (2014). Sources of core and intact branched tetraether membrane lipids in the lacustrine environment: Anatomy of Lake Challa and its catchment, equatorial East Africa. Geochim. Cosmochim. Acta 140: 106-126. http://dx.doi.org/10.1016/j.gca.2014.04.042, meer Chevalier, N.; Bouloubassi, I.; Stadnitskaia, A.; Taphanel, M.H.; Sinninghe Damsté, J.S. (2014). Lipid biomarkers for anaerobic oxidation of methane and sulphate reduction in cold seep sediments of Nyegga pockmarks (Norwegian margin): discrepancies in contents and carbon isotope signatures. Geo-Mar. Lett. 34(2-3): 269-280. dx.doi.org/10.1007/s00367-014-0363-5, meer Chivall, D.; M'Boule, D.; Sinke-Schoen, D.; Sinninghe Damsté, J.S.; Schouten, S.; van der Meer, M.T.J. (2014). Impact of salinity and growth phase on alkenone distributions in coastal haptophytes. Org. Geochem. 67: 31-34. dx.doi.org/10.1016/j.orggeochem.2013.12.002, meer Chivall, D.; M'Boule, D.; Sinke-Schoen, D.; Sinninghe Damsté, J.S.; Schouten, S.; van der Meer, M.T.J. (2014). The effects of growth phase and salinity on the hydrogen isotopic composition of alkenones produced by coastal haptophyte algae. Geochim. Cosmochim. Acta 140: 381–390. http://dx.doi.org/10.1016/j.gca.2014.05.043, meer Crowe, M.A.; Power, J.F.; Morgan, X.C.; Dunfield, P.F.; Lagutin, K.; Rijpstra, W.I.C.; Vyssotski, M.; Sinninghe Damsté, J.S.; Houghton, K.M.; Ryan, J.L.J.; Stott, M.B. (2014). Pyrinomonas methylaliphatogenes gen. nov., sp. nov., a novel group 4 thermophilic member of the phylum Acidobacteria from geothermal soils. Int. J. Syst. Evol. Microbiol. 64: 220-227. http://dx.doi.org/10.1099/ijs.0.055079-0, meer De Jonge, C.; Hopmans, E.C.; Zell, C.; Kim, J.H.; Schouten, S.; Sinninghe Damsté, J.S. (2014). Occurrence and abundance of 6-methyl branched glycerol dialkyl glycerol tetraethers in soils: Implications for palaeoclimate reconstruction. Geochim. Cosmochim. Acta 141: 97–112. dx.doi.org/10.1016/j.gca.2014.06.013, meer De Jonge, C.; Stadnitskaia, A.; Hopmans, E.C.; Cherkashov, G.; Fedotov, A.; Sinninghe Damsté, J. (2014). In situ produced branched glycerol dialkyl glycerol tetraethers in suspended particulate matter from the Yenisei River, Eastern Siberia. Geochim. Cosmochim. Acta 125: 476-491. dx.doi.org/10.1016/j.gca.2013.10.031, meer Heinzelmann, S.M.; Bale, N.J.; Hopmans, E.C.; Sinninghe Damsté, J.S.; Schouten, S.; van der Meer, M.T.J. (2014). Critical Assessment of Glyco- and Phospholipid Separation by Using Silica Chromatography. Appl. Environ. Microbiol. 80(1): 360-365. dx.doi.org/10.1128/AEM.02817-13, meer Jung, M.Y.; Park, S.J.; Kim, S.J.; Kim, J.G.; Sinninghe Damsté, J.S.; Jeon, C.O.; Rhee, S.K. (2014). A Mesophilic, Autotrophic, Ammonia-Oxidizing Archaeon of Thaumarchaeal Group I.1a Cultivated from a Deep Oligotrophic Soil Horizon. Appl. Environ. Microbiol. 80(12): 3645-3655. dx.doi.org/10.1128/AEM.03730-13, meer Kasper, S.; van der Meer, M.T.J.; Mets, A.; Zahn, R.; Sinninghe Damsté, J.S.; Schouten, S. (2014). Salinity changes in the Agulhas leakage area recorded by stable hydrogen isotopes of C₃₇ alkenones during Termination I and II. Clim. Past 10(1): 251-260. dx.doi.org/10.5194/cp-10-251-2014, meer Kim, J.-H.; Buscail, R.; Fanget, A.-S.; Eyrolle-Boyer, F.; Bassetti, M.-A.; Dorhout, D.; Baas, M.; Berné, S.; Sinninghe Damsté, J.S. (2014). Impact of river channel shifts on tetraether lipids in the Rhône prodelta (NW Mediterranean): Implication for the BIT index as an indicator of palaeoflood events. Org. Geochem. 75: 99-108. dx.doi.org/10.1016/j.orggeochem.2014.06.011, meer Kool, D.M.; Talbot, H.M.; Rush, D.; Ettwig, K.; Sinninghe Damsté, J.S. (2014). Rare bacteriohopanepolyols as markers for an autotrophic, intra-aerobic methanotroph. Geochim. Cosmochim. Acta 136: 114-125. dx.doi.org/10.1016/j.gca.2014.04.002, meer Kulichevskaya, I.S.; Suzina, N.E.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Dedysh, S.N. (2014). Paludibaculum fermentans gen. nov., sp. nov., a facultative anaerobe capable of dissimilatory iron reduction from subdivision 3 Acidobacteria. Int. J. Syst. Evol. Microbiol. 64: 2857-2864. https://dx.doi.org/10.1099/ijs.0.066175-0, meer Lengger, S.K.; Hopmans, E.C.; Sinninghe Damsté, J.S.; Schouten, S. (2014). Fossilization and degradation of archaeal intact polar tetraether lipids in deeply buried marine sediments (Peru Margin). Geobiol. 12(3): 212-220. dx.doi.org/10.1111/gbi.12081, meer Lengger, S.K.; Lipsewers, Y.A.; de Haas, H.; Sinninghe Damsté, J.S.; Schouten, S. (2014). Lack of 13C-label incorporation suggests low turnover rates of thaumarchaeal intact polar tetraether lipids in sediments from the Iceland shelf. Biogeosciences 11(2): 201-216. dx.doi.org/10.5194/bg-11-201-2014, meer Lengger, S.K.; Hopmans, E.C.; Sinninghe Damsté, J.S.; Schouten, S. (2014). Impact of sedimentary degradation and deep water column production on GDGT abundance and distribution in surface sediments in the Arabian Sea: Implicationsfor the TEX₈₆ paleothermometer. Geochim. Cosmochim. Acta 142: 386-399. http://dx.doi.org/10.1016/j.gca.2014.07.013, meer Lipsewers, Y.A.; Bale, N.J.; Hopmans, E.C.; Schouten, S.; Sinninghe Damsté, J.S.; Villanueva, L. (2014). Seasonality and depth distribution of the abundance and activity of ammonia oxidizing microorganisms in marine coastal sediments (North Sea). Front. Microbiol. 5: 471 1-12. dx.doi.org/10.3389/fmicb.2014.00472, meer Loomis, S.E.; Russell, J.M.; Heureux, A.M.; D'Andrea, W.J.; Sinninghe Damsté, J.S. (2014). Seasonal variability of branched glycerol dialkyl glycerol tetraethers (brGDGTs) in a temperate lake system. Geochim. Cosmochim. Acta 144: 173–187. dx.doi.org/10.1016/j.gca.2014.08.027, meer Loomis, S.E.; Russell, J.M.; Eggermont, H.; Verschuren, D.; Sinninghe Damsté, J.S. (2014). Effects of temperature, pH and nutrient concentration on branched GDGT distributions in East African lakes: Implications for paleoenvironmental reconstruction. Org. Geochem. 66: 25-37. dx.doi.org/10.1016/j.orggeochem.2013.10.012, meer López-Rodríguez, C.; Stadnitskaia, A.; De Lange, G.J.; Martínez-Ruíz, F; Comas, M.; Sinninghe Damsté, J.S. (2014). Origin of lipid biomarkers in mud volcanoes from the Alboran Sea, western Mediterranean. Biogeosciences 11: 3187-3204. http://dx.doi.org/10.5194/bg-11-3187-2014, meer Louterbach, M.; Roddaz, M.; Bailleul, J.; Antoine, P.O.; Adnet, S.; Kim, J.H.; van Soelen, E.E.; Parra, F.; Gérard, J.; Calderon, Y.; Gagnaison, C.; Sinninghe Damsté, J.S.; Baby, P. (2014). Evidences for a Paleocene marine incursion in southern Amazonia (Madre de Dios Sub-Andean Zone, Peru). Palaeogeogr. Palaeoclimatol. Palaeoecol. 414: 451–471. dx.doi.org/10.1016/j.palaeo.2014.09.027, meer Maat, D.S.; Bale, N.J.; Hopmans, E.C.; Baudoux, A.C.; Sinninghe Damsté, J.S.; Schouten, S.; Brussaard, C.P.D. (2014). Acquisition of intact polar lipids from the prymnesiophyte Phaeocystis globosa by its lytic virus PgV-07T. Biogeosciences 11(1): 185-194. dx.doi.org/10.5194/bg-11-185-2014, meer Mao, J.; Nierop, K.G.J.; Sinninghe Damsté, J.S.; Dekker, S.C. (2014). Roots induce stronger soil water repellency than leaf waxes. Geoderma 232-234: 328-340. http://dx.doi.org/10.1016/j.geoderma.2014.05.024, meer M'boule, D.; Chivall, D.; Sinke-Schoen, D.; Sinninghe Damsté, J.S.; Schouten, S.; van der Meer, M.T.J. (2014). Salinity dependent hydrogen isotope fractionation in alkenones produced by coastal and open ocean haptophyte algae. Geochim. Cosmochim. Acta 130: 126-135. dx.doi.org/10.1016/j.gca.2014.01.029, meer Moreira, I.S.; Moreira-Turcq, P.; Kim, J.H.; Turcq, B.; Cordeiro, R.C.; Caquineau, S.; Mandengo-Yogo, M.; Sinninghe Damsté, J.S. (2014). A mineralogical and organic geochemical overview of the effects of Holocene changes in Amazon River flow on three floodplain lakes. Palaeogeogr. Palaeoclimatol. Palaeoecol. 415: 152–164. dx.doi.org/10.1016/j.palaeo.2014.03.017, meer Mutterlose, J.; Bottini, C.; Schouten, S.; Sinninghe Damsté, J.S. (2014). High sea-surface temperatures during the early Aptian Oceanic Anoxic Event 1a in the Boreal Realm. Geology (Boulder Colo.) 42(5): 439-442. http://dx.doi.org/10.1130/G35394.1, meer Neumann, S.; Wessels, H.J.C.T.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Kartal, B.; Jetten, M.S.M.; van Niftrik, L. (2014). Isolation and characterization of a prokaryotic cell organelle from the anammox bacterium Kuenenia stuttgartiensis. Mol. Microbiol. 94(4): 794-802. dx.doi.org/10.1111/mmi.12816, meer Rampen, S.; Datema, M.; Rodrigo-Gámiz, M.; Schouten, S.; Reichart, G.-J.; Sinninghe Damsté, J.S. (2014). Sources and proxy potential of long chain alkyl diols in lacustrine environments. Geochim. Cosmochim. Acta 144: 59–71. dx.doi.org/10.1016/j.gca.2014.08.033, meer Rampen, S.W.; Willmott, V.; Kim, J.H.; Rodrigo-Gamiz, M.; Uliana, E.; Mollenhauer, G.; Schefuß, E.; Sinninghe Damsté, J.S.; Schouten, S. (2014). Evaluation of long chain 1,14-alkyl diols in marine sediments as indicators for upwelling and temperature. Org. Geochem. 76: 39–47. dx.doi.org/10.1016/j.orggeochem.2014.07.012, meer Rasigraf, O.; Kool, D.M.; Jetten, M.S.M.; Ettwig, K.F.; Sinninghe Damsté, J.S. (2014). Autotrophic Carbon Dioxide Fixation via the Calvin-Benson-Bassham Cycle by the Denitrifying Methanotroph "Candidatus Methylomirabilis oxyfera". Appl. Environ. Microbiol. 80(8): 2451-2460. dx.doi.org/10.1128/AEM.04199-13, meer Rodrigo-Gámiz, M.; Martínez-Ruiz, F.; Rampen, S.W.; Schouten, S.; Sinninghe Damsté, J.S. (2014). Sea surface temperature variations in the western Mediterranean Sea over the last 20 kyr: A dual-organic proxy (UK'₃₇ and LDI) approach. Paleoceanography 29(2): 87-98. dx.doi.org/10.1002/2013PA002466, meer Rush, D.; Sinninghe Damsté, J.S.; Poulton, S.W.; Thamdrup, B.; Leigh Garside, A.; Acuña-Gonzalez, J.; Schouten, S.; Jetten, M.S.M.; Talbot, H.M. (2014). Anaerobic ammonium-oxidising bacteria: A biological source of the bacteriohopanetetrol stereoisomer in marine sediments. Geochim. Cosmochim. Acta 140: 50-63. dx.doi.org/10.1016/j.gca.2014.05.014, meer Rush, D.; Jaeschke, A.; Geenevasen, J.A.J.; Tegelaar, E.; Pureveen, J.; Lewan, M.D.; Schouten, S.; Sinninghe Damsté, J.S. (2014). Generation of unusual branched long chain alkanes from hydrous pyrolysis of anammox bacterial biomass. Org. Geochem. 76: 136–145. dx.doi.org/10.1016/j.orggeochem.2014.08.002, meer Schouten, S.; Villanueva, L.; Hopmans, E.C.; van der Meer, M.T.J.; Sinninghe Damsté, J.S. (2014). Are Marine Group II Euryarchaeota significant contributors to tetraether lipids in the ocean? Proc. Natl. Acad. Sci. U.S.A. 111(41): e4285. dx.doi.org/10.1073/pnas.1416176111, meer Sinninghe Damsté, J.S.; Rijpstra, W.I.C.; Hopmans, E.C.; Foesel, B.U.; Wüst, P.K.; Overmann, J.; Tank, M.; Bryant, D.A.; Dunfield, P.F.; Houghton, K.; Stott, M. (2014). Ether- and Ester-Bound iso-Diabolic Acid and Other Lipids in Members of Acidobacteria Subdivision 4. Appl. Environ. Microbiol. 80(17): 5207-5218. https://dx.doi.org/10.1128/AEM.01066-14, meer Sinninghe Damsté, J.S.; Schouten, S.; Volkman, J.K. (2014). C₂₇-C₃₀ neohop-13(18)-enes and their saturated and aromatic derivatives in sediments: Indicators for diagenesis and water column stratification. Geochim. Cosmochim. Acta 133: 402-421. dx.doi.org/10.1016/j.gca.2014.03.008, meer Sorokin, D.Y.; Gumerov, V.M.; Rakitin, A.L.; Beletsky, A.V.; Sinninghe Damsté, J.S.; Muyzer, G.; Mardanov, A.V.; Ravin, N.V. (2014). Genome analysis of Chitinivibrio alkaliphilus gen. nov., sp. nov., a novel extremely haloalkaliphilic anaerobic chitinolytic bacterium from the candidate phylum Termite Group 3. Environ. Microbiol. 16(6): 1549–1565. dx.doi.org/10.1111/1462-2920.12284, meer Sorokin, D.Y.; Vejmelkova, D.; Lücker, S.; Streshinskaya, G.M.; Rijpstra, W.I.C.; Sinninghe Damsté, J.; Kleerbezem, R.; van Loosdrecht, M.C.M.; Muyzer, G.; Daims, H. (2014). Nitrolancea hollandica gen. nov., sp. nov., a chemolithoautotrophic nitrite-oxidizing bacterium isolated from a bioreactor belonging to the phylum Chloroflexi. Int. J. Syst. Evol. Microbiol. 64(6): 1859-1865. https://dx.doi.org/10.1099/ijs.0.062232-0, meer Svensson, E.; Freitas, V.; Schouten, S.; Middelburg, J.J.; van der Veer, H.W.; Sinninghe Damsté, J.S. (2014). Comparison of the stable carbon and nitrogen isotopic values of gill and white muscle tissue of fish. J. Exp. Mar. Biol. Ecol. 457: 173-179. dx.doi.org/10.1016/j.jembe.2014.04.014, meer Thomas, E.K.; Clemens, S.C.; Prell, W.L.; Herbert, T.D.; Huang, Y.S.; Liu, Z.; Sinninghe Damsté, J.S.; Sun, Y.; Wen, X. (2014). Temperature and leaf wax d²H records demonstrate seasonal and regional controls on Asian monsoon proxies. Geology (Boulder Colo.) 42(12): 1075-1078. dx.doi.org/10.1130/G36289.1, meer van Bree, L.G.J.; Rijpstra, W.I.C.; Cocquyt, C.; Al-Dhabi, N.-A.; Verschuren, D.; Sinninghe Damsté, J.S.; de Leeuw, J.W. (2014). Origin and palaeoenvironmental significance of C₂₅ and C₂₇n-alk-1-enes in a 25,000-year lake-sedimentary record from equatorial East Africa. Geochim. Cosmochim. Acta 145: 89–102. dx.doi.org/10.1016/j.gca.2014.08.035, meer van Gelder, A.H.; Sousa, D.Z.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Stams, A.J.M.; Sánchez-Andrea, I. (2014). Ercella succinigenes gen. nov., sp. nov., ananaerobic succinate-producing bacterium. Int. J. Syst. Evol. Microbiol. 64(7): 2449-2454. dx.doi.org/10.1099/ijs.0.058966-0 , meer van Helmond, N.A.G.M.; Sluijs, A.; Reichart, G.J; Sinninghe Damsté, J.S.; Slomp, C.P.; Brinkhuis, H. (2014). A perturbed hydrological cycle during Oceanic Anoxic Event 2. Geology (Boulder Colo.) 42(2): 123-126. dx.doi.org/10.1130/G34929.1, meer van Soelen, E.E.; Lammers, J.M.; Eglinton, T.I.; Sinninghe Damsté, J.S.; Reichart, G.-J. (2014). Unusual C₃₅ to C₃₈ alkenones in mid-Holocene sediments from a restricted estuary (Charlotte Harbor, Florida). Org. Geochem. 70: 20-28. dx.doi.org/10.1016/j.orggeochem.2014.01.021, meer Vellekoop, J.; Sluijs, A.; Smit, J.; Schouten, S.; Weijers, J.W.H.; Sinninghe Damsté, J.S.; Brinkhuis, H. (2014). Rapid short-term cooling following the Chicxulub impact at the Cretaceous-Paleogene boundary. Proc. Natl. Acad. Sci. U.S.A. 111(21): 7537-7541. http://dx.doi.org/10.1073/pnas.1319253111, meer Villanueva, L.; Rijpstra, W.I.C.; Schouten, S.; Sinninghe Damsté, J.S. (2014). Genetic biomarkers of the sterol-biosynthetic pathway in microalgae. Environmental Microbiology Reports 6(1): 35-44. dx.doi.org/10.1111/1758-2229.12106, meer Villanueva, L.; Sinninghe Damsté, J.S.; Schouten, S. (2014). A re-evaluation of the archaeal membrane lipid biosynthetic pathway. Nat. Rev., Microbiol. 12(6): 438-448. dx.doi.org/10.1038/nrmicro3260, meer Villanueva, L.; Hopmans, E.C.; Bale, N.; Schouten, S.; Sinninghe Damsté, J.S. (2014). Diversity and distribution of a key sulpholipid biosynthetic gene in marine microbial assemblages. Environ. Microbiol. 16(3): 774-787. dx.doi.org/10.1111/1462-2920.12202, meer Villanueva, L.; Besseling, M.; Rodrigo-Gamiz, M.; Rampen, S.; Verschuren, D.; Sinninghe Damsté, J.S. (2014). Potential biological sources of long chain alkyl diols in a lacustrine system. Org. Geochem. 68: 27-30. https://dx.doi.org/10.1016/j.orggeochem.2014.01.001, meer Weijers, J.W.H.; Schefuß, E.; Kim, J.-H.; Sinninghe Damsté, J.; Schouten, S. (2014). Constraints on the sources of branched tetraether membrane lipids in distal marine sediments. Org. Geochem. 72: 14-22. dx.doi.org/10.1016/j.orggeochem.2014.04.011, meer Zell, C.; Kim, J.H.; Balsinha, M.; Dorhout, D.; Fernandes, C.; Baas, M.; Sinninghe Damsté, J.S. (2014). Transport of branched tetraether lipids from the Tagus River basin to the coastal ocean of the Portuguese margin: consequences for the interpretation of the MBT’/CBT paleothermometer. Biogeosciences 11: 5637-5655. dx.doi.org/10.5194/bg-11-5637-2014, meer Zell, C.; Kim, J.H.; Hollander, D.; Lorenzoni, L.; Baker, P.; Guizan Silva, G.S.; Sinninghe Damsté, J.S. (2014). Sources and distributions of branched and isoprenoid tetraether lipids on the Amazon shelf and fan: Implications for the use of GDGT-based proxies in marine sediments. Geochim. Cosmochim. Acta 139: 293–312. http://dx.doi.org/10.1016/j.gca.2014.04.038, meer Bale, N.J.; Hopmans, E.C.; Schouten, S.; Sinninghe Damsté, J.S. (2013). Different seasonality of pelagic and benthic Thaumarchaeota in the North Sea. Biogeosciences 10: 7195–7206. http://dx.doi.org/10.5194/bg-10-7195-2013, meer Bauersachs, T.; Miller, S.R.; van der Meer, M.T.J.; Hopmans, E.C.; Schouten, S.; Sinninghe Damsté, J.S. (2013). Distribution of long chain heterocyst glycolipids in cultures of the thermophilic cyanobacterium Mastigocladus laminosus and a hot spring microbial mat. Org. Geochem. 56: 19-24. dx.doi.org/10.1016/j.orggeochem.2012.11.013, meer Blaga, C.I.; Reichart, G.J.; Lotter, A.F.; Anselmetti, F.S.; Sinninghe Damsté, J.S.; Anselmetti, F.S.; Sinninghe Damsté, J.S. (2013). A TEX₈₆ lake record suggests simultaneous shifts in temperature in Central Europe and Greenland during the last deglaciation. Geophys. Res. 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Geobiol. 11(1): 72-85. dx.doi.org/10.1111/gbi.12017, meer Haaijer, S.C.M.; Ji, K.; van Niftrik, L.; Hoischen, A.; Speth, D.R.; Jetten, M.S.M.; Sinninghe Damsté, J.S.; Op den Camp, H.J.M. (2013). A novel marine nitrite-oxidizing Nitrospira species from Dutch coastal North Sea water. Front. Microbiol. 4(60). http://dx.doi.org/10.3389/fmicb.2013.00060, meer Hamilton-Brehm, S.D.; Gibson, R.A.; Green, S.J.; Hopmans, E.C.; Schouten, S.; van der Meer, M.T.J.; Shields, J.P.; Sinninghe Damsté, J.S.; Elkins, J.G. (2013). Thermodesulfobacterium geofontis sp nov., a hyperthermophilic, sulfate-reducing bacterium isolated from Obsidian Pool, Yellowstone National Park. Extremophiles 17(2): 251-263. dx.doi.org/10.1007/s00792-013-0512-1, meer Hopmans, E.C.; dos Santos, R.A.L.; Mets, A.; Sinninghe Damsté, J.S.; Schouten, S. (2013). A novel method for the rapid analysis of levoglucosan in soils and sediments. Org. 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Nature Geoscience 6(8): 627-631. dx.doi.org/10.1038/NGEO1856, meer Losey, N.A.; Stevenson, B.S.; Busse, H.-J.; Sinninghe Damsté, J.S.; Rijpstra, W.I.C.; Rudd, S.; Lawson, P.A. (2013). Thermoanaerobaculum aquaticum gen. nov., sp. nov., the first cultivated member of Acidobacteria subdivision 23, isolated from a hot spring. Int. J. Syst. Evol. Microbiol. 63: 4149-4157. http://dx.doi.org/10.1099/ijs.0.051425-0, meer Moore, E.K.; Hopmans, E.C.; Rijpstra, W.I.C.; Villanueva, L.; Dedysh, S.N.; Wienk, H.; Schoutsen, F; Sinninghe Damsté, J.S. (2013). Novel Mono-, Di-, and Trimethylornithine Membrane Lipids in Northern Wetland Planctomycetes. Appl. Environ. Microbiol. 79(22): 6874-6884. http://dx.doi.org/10.1128/AEM.02169-13, meer Moreira, L.S.; Moreira-Turcq, P.; Turcq, B.; Cordeiro, R.C.; Kim, J.-H.; Caquineau, S.; Mandeng-Yogo, M.; Macario, K.D.; Sinninghe Damsté, J.S. (2013). Palaeohydrological controls on sedimentary organic matter in an Amazon floodplain lake, Lake Maracá (Brazil) during the late Holocene. Holocene 23(12): 1903– 1914. http://dx.doi.org/10.1177/0959683613508155, meer Nieto-Moreno, V.; Martínez-Ruiz, F.; Willmott, V.; García-Orellana, J.; Masqué, P.; Sinninghe Damsté, J.S. (2013). Climate conditions in the westernmost Mediterranean over the last two millennia: An integrated biomarker approach. Org. Geochem. 55: 1-10. dx.doi.org/10.1016/j.orggeochem.2012.11.001, meer Russ, L.; Kartal, B.; Op den Camp, H.J.M.; Sollai, M.; Le Bruchec, J.; Caprais, J.-C.; Godfroy, A.; Sinninghe Damsté, J.S.; Jetten, M.S.M. (2013). Presence and diversity of anammox bacteria in cold hydrocarbon-rich seeps and hydrothermal vent sediments of the Guaymas Basin. Front. Microbiol. 4(219). http://dx.doi.org/10.3389/fmicb.2013.00219, meer Schoon, P.L.; Heilmann-Clausen, C.; Schultz, B.P.; Sluijs, A.; Sinninghe Damsté, J.S.; Schouten, S. (2013). Recognition of Early Eocene global carbon isotope excursions using lipids of marine Thaumarchaeota. Earth Planet. Sci. Lett. 373: 160-168. dx.doi.org/10.1016/j.epsl.2013.04.037, meer Schoon, P.L.; de Kluijver, A.; Middelburg, J.J.; Downing, J.A.; Sinninghe Damsté, J.S.; Schouten, S. (2013). Influence of lake water pH and alkalinity on the distribution of coreand intact polar branched glycerol dialkyl glycerol tetraethers (GDGTs) in lakes. Org. Geochem. 60: 72-82. dx.doi.org/10.1016/j.orggeochem.2013.04.015, meer Schouten, S.; Villareal, T.A.; Hopmans, E.C.; Mets, A.; Swanson, K.M.; Sinninghe Damsté, J.S. (2013). Endosymbiotic heterocystous cyanobacteria synthesize different heterocyst glycolipids than free-living heterocystous cyanobacteria. Phytochemistry 85: 115-121. dx.doi.org/10.1016/j.phytochem.2012.09.002, meer Schouten, S.; Hopmans, E.C.; Sinninghe Damsté, J.S. (2013). The organic geochemistry of glycerol dialkyl glycerol tetraether lipids: A review. Org. 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Biogeosciences 10(3): 1775-1785. dx.doi.org/10.5194/bg-10-1775-2013, meer Vissers, E.W.; Blaga, C.I.; Bodelier, P.L.E.; Muyzer, G.; Schleper, C.; Sinninghe Damsté, J.S.; Tourna, M.; Laanbroek, H.J. (2013). Seasonal and vertical distribution of putative ammonia-oxidizing thaumarchaeotal communities in an oligotrophic lake. FEMS Microbiol. Ecol. 83(2): 515-526. dx.doi.org/10.1111/1574-6941.12013, meer Zell, C.; Kim, J.H.; Moreira-Turcq, P.; Abril, G.; Hopmans, E.C.; Bonnet, M.-P.; Lima Sobrinho, R.; Sinninghe Damsté, J.S. (2013). Disentangling the origins of branched tetraether lipids and crenarchaeol in the lower Amazon River: Implications for GDGT-based proxies. Limnol. Oceanogr. 58(1): 343-353. dx.doi.org/10.4319/lo.2013.58.1.0343, meer Zell, C.; Kim, J.-H.; Abril, G.; Lima Sobrinho, R.; Dorhout, D.; Moreiro-Turcq, P.; Sinninghe Damsté, J.S. (2013). Impact of seasonal hydrological variation on the distributions of tetraether lipids along the Amazon River in the central Amazon basin: implications for the MBT/CBT paleothermometer and the BIT index. Front. Microbiol. 4(228). http://dx.doi.org/10.3389/fmicb.2013.00228, meer Berke, M.A.; Johnson, T.C.; Werne, J.P.; Schouten, S.; Sinninghe Damsté, J.S. (2012). A mid-Holocene thermal maximum at the end of the African Humid Period. Earth Planet. Sci. Lett. 351: 95-104. dx.doi.org/10.1016/j.epsl.2012.07.008, meer Berke, M.A.; Johnson, T.C.; Werne, J.P.; Grice, K.; Schouten, S.; Sinninghe Damsté, J.S. (2012). Molecular records of climate variability and vegetation response since the Late Pleistocene in the Lake Victoria basin, East Africa. Quat. Sci. Rev. 55: 59-74. dx.doi.org/10.1016/j.quascirev.2012.08.014, meer Brandsma, J.; Hopmans, E.C.; Brussaard, C.P.D.; Witte, H.J.; Schouten, S.; Sinninghe Damsté, J.S. (2012). Spatial distribution of intact polar lipids in North Sea surface waters: Relationship with environmental conditions and microbial community composition. Limnol. Oceanogr. 57(4): 959-973. dx.doi.org/10.4319/lo.2012.57.4.0959, meer Brandsma, J.; Hopmans, E.C.; Philippart, C.J.M.; Veldhuis, M.J.W.; Schouten, S.; Sinninghe Damsté, J.S.S. (2012). Low temporal variation in the intact polar lipid composition of North Sea coastal marine water reveals limited chemotaxonomic value. Biogeosciences 9(3): 1073-1084. dx.doi.org/10.5194/bg-9-1073-2012, meer Dedysh, S.N.; Kulichevskaya, I.S.; Serkebaeva, Y.M.; Mityaeva, M.A.; Sorokin, V.V.; Suzina, N.E.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S. (2012). Bryocella elongata gen. nov., sp nov., a member of subdivision 1 of the Acidobacteria isolated from a methanotrophic enrichment culture, and emended description of Edaphobacter aggregans Koch et al. 2008. Int. J. Syst. Evol. 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Lett. 39. dx.doi.org/10.1029/2012GL051157, meer Kool, D.M.; Zhu, B.L.; Rijpstra, W.I.C.; Jetten, M.S.M.; Ettwig, K.F.; Sinninghe Damsté, J.S. (2012). Rare Branched Fatty Acids Characterize the Lipid Composition of the Intra-Aerobic Methane Oxidizer "Candidatus Methylomirabilis oxyfera". Appl. Environ. Microbiol. 78(24): 8650-8656. dx.doi.org/10.1128/AEM.02099-12, meer Kulichevskaya, I.S.; Detkova, E.N.; Bodelier, P.L.E.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Dedysh, S.N. (2012). Singulisphaera rosea sp nov., a planctomycete from acidic Sphagnum peat, and emended description of the genus Singulisphaera. Int. J. Syst. Evol. Microbiol. 62: 118-123. dx.doi.org/10.1099/ijs.0.025924-0, meer Kulichevskaya, I.S.; Serkebaeva, Y.M.; Kim, Y.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Liesack, W.; Dedysh, S.N. (2012). Telmatocola sphagniphila gen. nov., sp. nov., a Novel Dendriform Planctomycete from Northern Wetlands. Front. 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Comparison of extraction and work up techniques for analysis of core and intact polar tetraether lipids from sedimentary environments. Org. Geochem. 47: 34-40. dx.doi.org/10.1016/j.orggeochem.2012.02.009, meer Loomis, S.E.; Russell, J.M.; Ladd, B.; Street-Perrott, F.A.; Sinninghe Damsté, J.S. (2012). Calibration and application of the branched GDGT temperature proxy on East African lake sediments. Earth Planet. Sci. Lett. 357: 277-288. dx.doi.org/10.1016/j.epsl.2012.09.031, meer Mutterlose, J.; Malkoc, M.; Schouten, S.; Sinninghe Damsté, J.S. (2012). Reconstruction of vertical temperature gradients in past oceans - Proxy data from the Hauterivian-early Barremian (Early Cretaceous) of the Boreal Realm. Palaeogeogr. Palaeoclimatol. Palaeoecol. 363: 135-143. dx.doi.org/10.1016/j.palaeo.2012.09.006, meer Niemann, H.; Stadnitskaia, A.; Wirth, S.B.; Gilli, A.; Anselmetti, F.S.; Sinninghe Damsté, J.S.S.; Schouten, S.; Hopmans, E.C.; Lehmann, M.F. (2012). Bacterial GDGTs in Holocene sediments and catchment soils of a high Alpine lake: application of the MBT/CBT-paleothermometer. Clim. Past 8(3): 889-906. dx.doi.org/10.5194/cp-8-889-2012, meer Peterse, F.; van der Meer, J.; Schouten, S.; Weijers, J.W.H.; Fierer, N.; Jackson, R.B.; Kim, J.H.; Sinninghe Damsté, J.S. (2012). Revised calibration of the MBT-CBT paleotemperature proxy based on branched tetraether membrane lipids in surface soils. Geochim. Cosmochim. Acta 96: 215-229. dx.doi.org/10.1016/j.gca.2012.08.011, meer Rampen, S.W.; Willmott, V.; Kim, J.H.; Uliana, E.; Mollenhauer, G.; Schefuss, E.; Sinninghe Damsté, J.S.; Schouten, S. (2012). Long chain 1,13-and 1,15-diols as a potential proxy for palaeotemperature reconstruction. Geochim. Cosmochim. Acta 84: 204-216. dx.doi.org/10.1016/j.gca.2012.01.024, meer Rush, D.; Hopmans, E.C.; Wakeham, S.G.; Schouten, S.; Sinninghe Damsté, J.S. (2012). Occurrence and distribution of ladderane oxidation products in different oceanic regimes. Biogeosciences 9(7): 2407-2418. dx.doi.org/10.5194/bg-9-2407-2012, meer Rush, D.; Wakeham, S.G.; Hopmans, E.C.; Schouten, S.; Sinninghe Damsté, J.S. (2012). Biomarker evidence for anammox in the oxygen minimum zone of the Eastern Tropical North Pacific. Org. Geochem. 53: 80-87. dx.doi.org/10.1016/j.orggeochem.2012.02.005, meer Sáenz, J.P.; Hopmans, E.C.; Rogers, D.; Henderson, P.B.; Charette, M.A.; Schouten, S.; Casciotti, K.L.; Sinninghe Damsté, J.S.; Eglinton, T.I. (2012). Distribution of anaerobic ammonia-oxidizing bacteria in a subterranean estuary. Mar. Chem. 136: 7-13. dx.doi.org/10.1016/j.marchem.2012.04.004, meer Schouten, S.; Pitcher, A.; Hopmans, E.C.; Villanueva, L.; van Bleijswijk, J.; Sinninghe Damsté, J.S. (2012). Intact polar and core glycerol dibiphytanyl glycerol tetraether lipids in the Arabian Sea oxygen minimum zone: I. Selective preservation and degradation in the water column and consequences for the TEX₈₆. Geochim. Cosmochim. Acta 98: 228-243. https://dx.doi.org/10.1016/j.gca.2012.05.002, meer Schouten, S.; Rijpstra, W.I.C.; Durisch-Kaiser, E.; Schubert, C.J.; Sinninghe Damsté, J.S. (2012). Distribution of glycerol dialkyl glycerol tetraether lipids in the water column of Lake Tanganyika. Org. Geochem. 53: 34-37. doi.org/10.1016/j.orggeochem.2012.01.009, meer Seki, O.; Schmidt, D.N.; Schouten, S.; Hopmans, E.C.; Sinninghe Damsté, J.S.; Pancost, R.D. (2012). Paleoceanographic changes in the Eastern Equatorial Pacific over the last 10 Myr. Paleoceanography 27. dx.doi.org/10.1029/2011PA002158, meer Sinninghe Damsté, J.S.; Ossebaar, J.; Schouten, S.; Verschuren, D. (2012). Distribution of tetraether lipids in the 25-ka sedimentary record of Lake Challa: extracting reliable TEX₈₆ and MBT/CBT palaeotemperatures from an equatorial African lake. Quat. Sci. Rev. 50: 43-54. https://dx.doi.org/10.1016/j.quascirev.2012.07.001, meer Sinninghe Damsté, J.S.; Rijpstra, W.I.C.; Hopmans, E.C.; Jung, M.Y.; Kim, J.G.; Rhee, S.K.; Stieglmeier, M.; Schleper, C. (2012). Intact Polar and Core Glycerol Dibiphytanyl Glycerol Tetraether Lipids of Group I.1a and I.1b Thaumarchaeota in Soil. Appl. Environ. Microbiol. 78(19): 6866-6874. dx.doi.org/10.1128/AEM.01681-12, meer Tierney, J.E.; Schouten, S.; Pitcher, A.; Hopmans, E.C.; Sinninghe Damsté, J.S. (2012). Core and intact polar glycerol dialkyl glycerol tetraethers (GDGTs) in Sand Pond, Warwick, Rhode Island (USA): Insights into the origin of lacustrine GDGTs. Geochim. Cosmochim. Acta 77: 561-581. dx.doi.org/10.1016/j.gca.2011.10.018, meer van Bentum, E.C.; Reichart, G.J.; Sinninghe Damsté, J.S. (2012). Organic matter provenance, palaeoproductivity and bottom water anoxia during the Cenomanian/Turonian oceanic anoxic event in the Newfoundland Basin (northern proto North Atlantic Ocean). Org. Geochem. 50: 11-18. dx.doi.org/10.1016/j.orggeochem.2012.05.013, meer van Bentum, E.C.; Reichart, G.J.; Forster, A.; Sinninghe Damsté, J.S.S. (2012). Latitudinal differences in the amplitude of the OAE-2 carbon isotopic excursion: pCO₂ and paleo productivity. Biogeosciences 9(2): 717-731. dx.doi.org/10.5194/bg-9-717-2012, meer van Winden, J.F.; Talbot, H.M.; Kip, N.; Reichart, G.J.; Pol, A.; McNamara, N.P.; Jetten, M.S.M.; Op den Camp, H.J.M.; Sinninghe Damsté, J.S. (2012). Bacteriohopanepolyol signatures as markers for methanotrophic bacteria in peat moss. Geochim. Cosmochim. Acta 77: 52-61. dx.doi.org/10.1016/j.gca.2011.10.026, meer van Winden, J.F.; Reichart, G.J.; McNamara, N.P.; Benthien, A.; Sinninghe Damsté, J.S. (2012). Temperature-Induced Increase in Methane Release from Peat Bogs: A Mesocosm Experiment. PLoS One 7(6): e39614. dx.doi.org/10.1371/journal.pone.0039614, meer van Winden, J.F.; Talbot, H.M.; De Vleeschouwer, F.; Reichart, G.J.; Sinninghe Damsté, J.S. (2012). Variation in methanotroph-related proxies in peat deposits from Misten Bog, Hautes-Fagnes, Belgium. Org. Geochem. 53: 73-79. dx.doi.org/10.1016/j.orggeochem.2012.07.001, meer Wakeham, S.G.; Turich, C.; Schubotz, F.; Podlaska, A.; Li, X.N.; Varela, R.; Astor, Y.; Sáenz, J.P.; Rush, D.; Sinninghe Damsté, J.S.; Summons, R.E.; Taylor, G.T.; Scranton, M.I.; Hinrichs, K.U. (2012). Biomarkers, chemistry and microbiology show chemoautotrophy in a multilayer chemocline in the Cariaco Basin. Deep-Sea Res., Part 1, Oceanogr. Res. Pap. 63: 133-156. dx.doi.org/10.1016/j.dsr.2012.01.005, meer Woltering, M.; Werne, J.P.; Kish, J.L.; Hicks, R.; Sinninghe Damsté, J.S.; Schouten, S. (2012). Vertical and temporal variability in concentration and distribution of thaumarchaeotal tetraether lipids in Lake Superior and the implications for the application of the TEX₈₆ temperature proxy. Geochim. Cosmochim. Acta 87: 136-153. dx.doi.org/10.1016/j.gca.2012.03.024, meer Yan, J.; Haaijer, S.C.M.; Op den Camp, H.J.M.; van Niftrik, L.; Stahl, D.A.; Könneke, M.; Rush, D.; Sinninghe Damsté, J.S.; Hu, Y.Y.; Jetten, M.S.M. (2012). Mimicking the oxygen minimum zones: stimulating interaction of aerobic archaeal and anaerobic bacterial ammonia oxidizers in a laboratory-scale model system. Environ. Microbiol. 14(12): 3146-3158. dx.doi.org/10.1111/j.1462-2920.2012.02894.x, meer Bauersachs, T.; Compaoré, J.; Severin, I.; Hopmans, E.C.; Schouten, S.; Stal, L.J.; Sinninghe Damsté, J.S. (2011). Diazotrophic microbial community of coastal microbial mats of the southern North Sea. Geobiol. 9(4): 349-359. dx.doi.org/10.1111/j.1472-4669.2011.00280.x, meer Blaga, C.I.; Reichart, G.J.; Vissers, E.W.; Lotter, A.F.; Anselmetti, F.S.; Sinninghe Damsté, J.S.; Sinninghe Damsté, J.S. (2011). Seasonal changes in glycerol dialkyl glycerol tetraether concentrations and fluxes in a perialpine lake: Implications for the use of the TEX₈₆ and BIT proxies. Geochim. Cosmochim. Acta 75(21): 6416-6428. dx.doi.org/10.1016/j.gca.2011.08.016, meer Boere, A.C.; Sinninghe Damsté, J.S.; Rijpstra, W.I.C.; Volkman, J.K.; Coolen, M.J.L. (2011). Source-specific variability in post-depositional DNA preservation with potential implications for DNA based paleoecological records. Org. Geochem. 42(10): 1216-1225. dx.doi.org/10.1016/j.orggeochem.2011.08.005, meer Boere, A.C.; Rijpstra, W.I.C.; de Lange, G.J.; Sinninghe Damsté, J.S.; Coolen, M.J.L.; Sinninghe Damsté, J.S.; Coolen, M.J.L. (2011). Preservation potential of ancient plankton DNA in Pleistocene marine sediments. Geobiol. 9(5): 377-393. dx.doi.org/10.1111/j.1472-4669.2011.00290.x, meer Boere, A.C.; Rijpstra, W.I.C.; de Lange, G.J.; Malinverno, E.; Sinninghe Damsté, J.S.; Coolen, M.J.L.; Sinninghe Damsté, J.S.; Coolen, M.J.L. (2011). Exploring preserved fossil dinoflagellate and haptophyte DNA signatures to infer ecological and environmental changes during deposition of sapropel S1 in the eastern Mediterranean. Paleoceanography 26. dx.doi.org/10.1029/2010PA001948, meer Brandsma, J.; van de Vossenberg, J.; Risgaard-Petersen, N.; Schmid, M.C.; Engstrom, P.; Eurenius, K.; Hulth, S.; Jaeschke, A.; Abbas, B.; Hopmans, E.C.; Strous, M.; Schouten, S.; Jetten, M.S.M.; Sinninghe Damsté, J.S. (2011). A multi-proxy study of anaerobic ammonium oxidation in marine sediments of the Gullmar Fjord, Sweden. Environmental Microbiology Reports 3(3): 360-366. dx.doi.org/10.1111/j.1758-2229.2010.00233.x, meer Caley, T.; Kim, J.H.; Malaize, B.; Giraudeau, J.; Laepple, T.; Caillon, N.; Charlier, K.; Rebaubier, H.; Rossignol, L.; Castañeda, I.S; Schouten, S.; Sinninghe Damsté, J.S. (2011). High-latitude obliquity as a dominant forcing in the Agulhas current system. Clim. Past 7(4): 1285-1296. dx.doi.org/10.5194/cp-7-1285-2011, meer Fawcett, P.J.; Werne, J.P.; Anderson, R.S.; Heikoop, J.M.; Brown, E.T.; Berke, M.A.; Smith, S.J.; Goff, F.; Donohoo-Hurley, L.; Cisneros-Dozal, L.M.; Schouten, S.; Sinninghe Damsté, J.S.; Huang, Y.S.; Toney, J.; Fessenden, J.; WoldeGabriel, G.; Atudorei, V.; Geissman, J.W.; Allen, C.D. (2011). Extended megadroughts in the southwestern United States during Pleistocene interglacials. Nature (Lond.) 470(7335): 518-521. dx.doi.org/10.1038/nature09839, meer Hu, B.L.; Rush, D.; van der Biezen, E.; Zheng, P.; van Mullekom, M.; Schouten, S.; Sinninghe Damsté, J.S.; Smolders, A.J.P.; Jetten, M.S.M.; Kartal, B. (2011). New Anaerobic, Ammonium-Oxidizing Community Enriched from Peat Soil. Appl. Environ. Microbiol. 77(3): 966-971. dx.doi.org/10.1128/AEM.02402-10, meer Huguet, C.; Martrat, B.; Grimalt, J.O.; Sinninghe Damsté, J.S.; Schouten, S. (2011). Coherent millennial-scale patterns in U₃₇^k' and TEX₈₆^H temperature records during the penultimate interglacial-to-glacial cycle in the western Mediterranean. Paleoceanography 26. dx.doi.org/10.1029/2010PA002048, meer Jung, M.Y.; Park, S.J.; Min, D.; Kim, J.S.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S.; Kim, G.J.; Madsen, E.L.; Rhee, S.K. (2011). Enrichment and Characterization of an Autotrophic Ammonia-Oxidizing Archaeon of Mesophilic Crenarchaeal Group I.1a from an Agricultural Soil. Appl. Environ. Microbiol. 77(24): 8635-8647. dx.doi.org/10.1128/AEM.05787-11, meer Kim, J.-H.; Peterse, F.; Willmott, V.; Klitgaard Kristensen, D.; Baas, M.; Schouten, S.; Sinninghe Damsté, J.S. (2011). Large ancient organic matter contributions to Arctic marine sediments (Svalbard). Limnol. Oceanogr. 56(4): 1463-1474. dx.doi.org/10.4319/lo.2011.56.4.1463, meer Kip, N.; Ouyang, W.J.; van Winden, J.; Raghoebarsing, A.; van Niftrik, L.; Pol, A.; Pan, Y.; Bodrossy, L.; van Donselaar, E.G.; Reichart, G.J.; Jetten, M.S.M.; Sinninghe Damsté, J.S.; Op den Camp, H.J.M. (2011). Detection, Isolation, and Characterization of Acidophilic Methanotrophs from Sphagnum Mosses. Appl. Environ. Microbiol. 77(16): 5643-5654. dx.doi.org/10.1128/AEM.05017-11, meer Loomis, S.E.; Russell, J.M.; Sinninghe Damsté, J.S. (2011). Distributions of branched GDGTs in soils and lake sediments from western Uganda: Implications for a lacustrine paleothermometer. Org. Geochem. 42(7): 739-751. dx.doi.org/10.1016/j.orggeochem.2011.06.004, meer Mußmann, M; Brito, I.; Pitcher, A.; Sinninghe Damste, J.S.; Hatzenpichler, R.; Richter, A.; Nielsen, J.L.; Nielsen, P.H.; Daims, H.; Müller, A.; Wagner, M.; Head, I.M. (2011). Thaumarchaeotes abundant in refinery nitrifying sludges express amoA but are not obligate autotrophic ammonia oxidizers. Proc. Natl. Acad. Sci. U.S.A. 108(40): 16771-16776. dx.doi.org/10.1073/pnas.1106427108, meer Peterse, F.; Hopmans, E.C.; Schouten, S.; Rijpstra, W.I.C.; Sinninghe Damsté, J.S. (2011). Identification and distribution of intact polar branched tetraether lipids in peat and soil. Org. Geochem. 42(9): 1007-1015. dx.doi.org/10.1016/j.orggeochem.2011.07.006, meer Peterse, F.; Prins, M.A.; Beets, C.J.; Troelstra, S.R.; Zheng, H.B.; Gu, Z.Y.; Schouten, S.; Sinninghe Damsté, J.S. (2011). Decoupled warming and monsoon precipitation in East Asia over the last deglaciation. Earth Planet. Sci. Lett. 301(1-2): 256-264. dx.doi.org/10.1016/j.epsl.2010.11.010, meer Pitcher, A.; Villanueva, L.; Hopmans, E.C.; Schouten, S.; Reichart, G.J.; Sinninghe Damsté, J.S. (2011). Niche segregation of ammonia-oxidizing archaea and anammox bacteria in the Arabian Sea oxygen minimum zone. ISME J. 5(12): 1896-1904. dx.doi.org/10.1038/ismej.2011.60, meer Pitcher, A.; Wuchter, C.; Siedenberg, K.; Schouten, S.; Sinninghe Damsté, J.S. (2011). Crenarchaeol tracks winter blooms of ammonia-oxidizing Thaumarchaeota in the coastal North Sea. Limnol. Oceanogr. 56(6): 2308-2318. dx.doi.org/10.4319/lo.2011.56.6.2308, meer Powers, L.A.; Johnson, T.C.; Werne, J.P.; Castañeda, I.S.; Hopmans, E.C.; Sinninghe Damsté, J.S.; Schouten, S. (2011). Organic geochemical records of environmental variability in Lake Malawi during the last 700 years, Part I: The TEX₈₆ temperature record. Palaeogeogr. Palaeoclimatol. Palaeoecol. 303(1-4): 133-139. dx.doi.org/10.1016/j.palaeo.2010.09.006, meer Rampen, S.W.; Schouten, S.; Sinninghe Damsté, J.S. (2011). Occurrence of long chain 1,14-diols in Apedinella radians. Org. Geochem. 42(5): 572-574. dx.doi.org/10.1016/j.orggeochem.2011.03.009, meer Ruhl, M.; Bonis, N.R.; Reichart, G.J.; Sinninghe Damsté, J.S.; Kürschner, W.M. (2011). Atmospheric Carbon Injection Linked to End-Triassic Mass Extinction. Science (Wash.) 333(6041): 430-434. dx.doi.org/10.1126/science.1204255, meer Rush, D.; Jaeschke, A.; Hopmans, E.C.; Geenevasen, J.A.J.; Schouten, S.; Sinninghe Damsté, J.S. (2011). Short chain ladderanes: Oxic biodegradation products of anammox lipids. Geochim. Cosmochim. Acta 75(6): 1662-1671. dx.doi.org/10.1016/j.gca.2011.01.013, meer Schoon, P.L.; Sluijs, A.; Sinninghe Damsté, J.S.; Schouten, S. (2011). Stable carbon isotope patterns of marine biomarker lipids in the Arctic Ocean during Eocene Thermal Maximum 2. Paleoceanography 26. dx.doi.org/10.1029/2010PA002028, meer Sinninghe Damsté, J.S.; Verschuren, D.; Ossebaar, J.; Blokker, J.; van Houten, R.; Plessen, B.; Schouten, S. (2011). A 25,000-year record of climate-induced changes in lowland vegetation of eastern equatorial Africa revealed by the stable carbon-isotopic composition of fossil plant leaf waxes. Earth Planet. Sci. Lett. 302(1-2): 236-246. dx.doi.org/10.1016/j.epsl.2010.12.025, meer Sinninghe Damsté, J.S.; Rijpstra, W.I.C.; Hopmans, E.C.; Weijers, J.W.; Foesel, B.U.; Overmann, J.; Dedysh, S.N. (2011). 13,16-Dimethyl Octacosanedioic Acid (iso-Diabolic Acid), a Common Membrane-Spanning Lipid of Acidobacteria Subdivisions 1 and 3. Appl. Environ. Microbiol. 77(12): 4147-4154. dx.doi.org/10.1128/AEM.00466-11, meer Tierney, J.; Russell, J.M.; Sinninghe Damsté, J.S.; Huang, Y.S.; Verschuren, D. (2011). Late Quaternary behavior of the East African monsoon and the importance of the Congo Air Boundary. Quat. Sci. Rev. 30(7-8): 798-807. dx.doi.org/10.1016/j.quascirev.2011.01.017, meer van Geel, B.; Gelorini, V.; Lyaruu, A.; Aptroot, A.; Rucina, S.; Marchant, R.; Sinninghe Damsté, J.S.; Verschuren, D. (2011). Diversity and ecology of tropical African fungal spores from a 25,000-year palaeoenvironmental record in southeastern Kenya. Rev. Palaeobot. Palynol. 164(3-4): 174-190. dx.doi.org/10.1016/j.revpalbo.2011.01.002, meer Weijers, J.W.H.; Bernhardt, B.; Peterse, F.; Werne, J.P.; Dungait, J.A.J.; Schouten, S.; Sinninge Damsté, J.S. (2011). Absence of seasonal patterns in MBT-CBT indices in mid-latitude soils. Geochim. Cosmochim. Acta 75(11): 3179-3190. dx.doi.org/10.1016/j.gca.2011.03.015, meer Weijers, J.W.H.; Steinmann, P.; Hopmans, E.C.; Schouten, S.; Sinninghe Damsté, J.S. (2011). Bacterial tetraether membrane lipids in peat and coal: Testing the MBT-CBT temperature proxy for climate reconstruction. Org. Geochem. 42(5): 477-486. dx.doi.org/10.1016/j.orggeochem.2011.03.013, meer Weijers, J.W.H.; Lim, K.L.H.; Aquilina, A.; Sinninghe Damsté, J.S.; Pancost, R.D. (2011). Biogeochemical controls on glycerol dialkyl glycerol tetraether lipid distributions in sediments characterized by diffusive methane flux. Geochem. Geophys. Geosyst. 12. dx.doi.org/10.1029/2011GC003724, meer Wolff, C.; Haug, G.H.; Timmermann, A.; Brauer, A.; Sigman, D.M.; Cane, M.A.; Verschuren, D.; Sinninghe Damsté, J.S. (2011). Reduced interannual rainfall variability in East Africa during the last ice age. Science (Wash.) 333(6043): 743-747. https://dx.doi.org/10.1126/science.1203724, meer Woltering, M.; Johnson, T.C.; Werne, J.P.; Schouten, S.; Sinninghe Damsté, J.S. (2011). Late Pleistocene temperature history of Southeast Africa: A TEX₈₆ temperature record from Lake Malawi. Palaeogeogr. Palaeoclimatol. Palaeoecol. 303(1-4): 93-102. dx.doi.org/10.1016/j.palaeo.2010.02.013, meer Pagani, M.; Pedentchouk, N.; Huber, M.; Sluijs, A.; Schouten, S.; Brinkhuis, H.; Sinninghe Damsté, J.S.; Dickens, G.R.; Expedition 302 Scientists (2006). Arctic hydrology during global warming at the Palaeocene/Eocene thermal maximum. Nature (Lond.) 442(7103): 671-675, meer Schefuβ, E.; Schouten, S.; Jansen, J.H.F.; Sinninghe Damsté, J.S. (2003). African vegetation controlled by tropical sea surface temperatures in the mid-Pleistocene period. Nature (Lond.) 422(6930): 418-421, meer
Peer reviewed publicaties (2) [show]
Mollenhauer, G.; Basse, A.; Kim, J.H.; Sinninghe Damsté, J.S.; Fischer, G. (2015). A four-year record of UK^k'₃₇- and TEX₈₆-derived sea surface temperature estimates from sinking particles in the filamentous upwelling region off Cape Blanc, Mauritania. Deep-Sea Res. Pt. A: Oceanogr. Res. Pap.A: Oceanogr. Res. Pap 97: 67–79. dx.doi.org/10.1016/j.dsr.2014.11.015, meer Sinninghe Damsté, J.S. (1998). Molecular palaeontology of marine sediments: PIONIER project: final report 1993-1998. NIOZ-rapport, 1998(6). NIOZ: Texel. 117 pp., meer
Overige publicatie [show]
Dedysh, S.N.; Sinninghe Damsté, J.S. (2018). Acidobacteria. Encycl. Life Sci. (Online) January. https://dx.doi.org/10.1002/9780470015902.a0027685, meer
Thesis (co-)promotor (24) [show]
Smit, N.T. (2021). Novel lipid biomarkers for detecting microbial oxidation of methane in the environment. PhD Thesis. Utrecht University: Utrecht. ISBN 978-94-6421-424-6 . https://doi.org/?10.33540/801, meer Reiche, S. (2020). The impact of diagenesis and sequestration on long-chain diols and related indicies. PhD Thesis. University of Utrecht: Utrecht. ISBN 9789463326490. 127 pp., meer Suominen, S. (2020). The role of microorganisms in the cycling of organic matter in anoxic marine environments. A culture-independent approach. PhD Thesis. Utrecht University: Utrecht. ISBN 978-94-6332-643-8. https://doi.org/10.33540/117, meer van Grinsven, S. (2020). Microorganisms and electron acceptors affecting methane oxidation in freshwater and marine systems. PhD Thesis. Utrecht University: Utrecht. ISBN 978-94-6332-631-5. 182 pp. https://doi.org/10.33540/33, meer Witkowski, C.R. (2020). Reconstructing past atmospheric CO₂ levels from the stable carbon isotopic composition of general algal biomarkers. PhD Thesis. Utrecht University: Utrecht. ISBN 978-94-6380-644-2. https://hdl.handle.net/1874/389900, meer Besseling, M. (2019). Sources and genetic controls of lipid biomarkers involved in paleotemperature proxies. Utrecht Studies in Earth Sciences, 198. PhD Thesis. Utrecht University: Utrecht. ISBN 978-90-6266-556-3. https://hdl.handle.net/1874/386074, meer de Bar, M. (2019). Constraints on the use of long-chain diols as environmental proxies. PhD Thesis. Utrecht University: Utrecht. ISBN 978-94-6332-471-7. https://hdl.handle.net/1874/379769, meer Lattaud, J. (2019). Sources and proxy potential of long-chain diols in marine and continental settings. PhD Thesis. Utrecht University: Utrecht. ISBN 9789402814507. 156 pp., meer Schreuder, L.T. (2019). Tracing ancient biomass burning using levoglucosan in marine and lake sediments. PhD Thesis. Utrecht University: Utrecht. ISBN 9789402814569. 148 pp., meer Weiss, G.M. (2019). Hydrogen isotope composition of algal chemical fossils: a tool for reconstructing paleo sea surface salinity. PhD Thesis. Utrecht University: Utrecht. ISBN 978-94-6375-466-8. 150 pp. https://hdl.handle.net/1874/384352, meer Sollai, M. (2018). Lipids as indicators of nitrogen cycling in present and past anoxic oceans. PhD Thesis. Utrecht University: Utrecht. ISBN 9789062665051. 271 pp. https://hdl.handle.net/1874/367934, meer Lipsewers, Y.A. (2017). Role of chemolithoautotrophic microorganisms involved in nitrogen and sulfur cycling in coastal marine sediments. PhD Thesis. [S.n.]: [s.l.]. ISBN 978-90-6266-4924. 225 pp. https://hdl.handle.net/1874/357552, meer Warden, L.A. (2017). Paleoenvironmental reconstructions in the Baltic Sea and Iberian margin : Assessment of GDGTs and long-chain alkenones in Holocene sedimentary records. PhD Thesis. NIOZ: Texel. 249 pp. https://hdl.handle.net/1874/348276, meer de Jonge, C. (2015). Sources and sinks of branched tetraether lipids and bacteriohopanepolyols in a major river system (Yenisei River – Kara Sea: Implications for their application as geochemical tracers. PhD Thesis. Universiteit Utrecht (UU): Utrecht. ISBN 978-94-6203-808-0. 254 pp. hdl.handle.net/1874/314974, meer Heinzelmann, S.M. (2015). Metabolism of microbial communities in the environment : A compound-specific stable hydrogen isotope approach. PhD Thesis. Utrecht University: Utrecht. ISBN 9789462039599. 187 pp. hdl.handle.net/1874/328058, meer Kasper, S. (2015). Reconstruction of past changes in ocean salinity - a compound specific stable hydrogen isotope approach. PhD Thesis. Universiteit Utrecht (UU): Utrecht. ISBN 978-94-6203-839-4. 140 pp. hdl.handle.net/1874/313601, meer Zell, C. (2014). Origin and fate of branched tetraether lipids in river drainage systems : Implications for the use of the MBT/CBT proxy as a continental palaeothermometer in marine sedimentary records. PhD Thesis. [S.n.]: [s.l.]. 201 pp. hdl.handle.net/1874/292558, meer Lengger, S.K. (2013). Production and preservation of archaeal glycerol dibiphytanyl glycerol tetraethersas intact polar lipids in marine sediments: Implications for their use in microbial ecology and TEX₈₆ paleothermometry. PhD Thesis. Universiteit Utrecht: [s.l.]. ISBN 978-94-6203-385-6. 1-228 pp. hdl.handle.net/1874/277354, meer Schoon, P.L. (2013). Impact of CO₂ and pH on the distribution and stable carbon isotopic composition of microbial biomarker lipids. PhD Thesis. Universiteit Utrecht: [s.l.]. ISBN 978-94-6203-299-6. 185 pp. hdl.handle.net/1874/274222, meer Lopes dos Santos, R.A. (2012). Reconstruction of late Quaternary marine and terrestrial environmental conditions of Northwest Africa and Southeast Australia A multiple organic proxy study using marine sediments. PhD Thesis. Universiteit Utrecht: [s.l.]. ISBN 978-94-6203-218-7. 145 pp. hdl.handle.net/1874/258158, meer Rush, D.J. (2012). Ladderanes as tracers for present and past anaerobic ammonium oxidation. PhD Thesis. Universiteit Utrecht: [s.l.]. ISBN 978-94-6203-168-5. 133 pp. hdl.handle.net/1874/257091, meer Brandsma, J. (2011). The origin and fate of intact polar lipids in the marine environment. PhD Thesis. [S.n.]: [s.l.]. ISBN 978-90-6266-286-9. 1-223 pp. hdl.handle.net/1874/213581, meer Peterse, F. (2011). Environmental controls on the distribution of bacterial tetraether membrane lipids: Constraints on the MBT-CBT paleothermometer. PhD Thesis. [S.n.]: [s.l.]. ISBN 978-90-8570-839-1. 1-143 pp. hdl.handle.net/1874/208643, meer Pitcher, A. (2011). Intact polar lipids of ammonia-oxidizing Archaea: Structural diversity anapplication inmolecular ecology. Geologica ultraiectina, mededelingen van de faculteit aardwetenschappen, 337. PhD Thesis. [S.n.]: [s.l.]. ISBN 978-90-5744-198-1. 1-227 pp. http://hdl.handle.net/1874/200226, meer